Streptococcus periodonticum: EHW89_07985
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Entry
EHW89_07985 CDS
T06568
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
spei
Streptococcus periodonticum
Pathway
spei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EHW89_07985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spei03400
]
EHW89_07985
Enzymes [BR:
spei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EHW89_07985
DNA repair and recombination proteins [BR:
spei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EHW89_07985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
DEAD
PhoH
HHH_5
UvrD_C
Herpes_Helicase
nSTAND3
AAA_12
RsgA_GTPase
AAA_22
AAA_28
5_3_exonuc
AAA_29
NPHP3_N
FtsK_SpoIIIE
NTPase_1
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AZQ42690
UniProt:
A0A3Q9F032
LinkDB
All DBs
Position
1643810..1646164
Genome browser
AA seq
784 aa
AA seq
DB search
MEFYFSGTIERIIFENPSSFFRILLLDIDDTDADFDDFEIIITGTMADIMEGEDYTFWGN
LVQHPKYGEQLKITRYERAKPTSKGLVKYFSSDHFKGIGVKTAQKIVDLYGDNAIDKVLA
EPEKLKDIAGLSAKNREAFLTKLRQNYGTERILAKLSEYGIPNKLAFQIQDFYKEETLEI
VEHYPYQLVEDIQGIGFKIADQLAQSLGIESTAPERFRAGLLHTLLIQSMEKGDTYLEAK
ELLEGTIELLESSRQIELDSSSVADELAHLIEEDKVQNVDTKIFENSLFFAEERIRSSLL
RILEKGKQNKFEPKKIEAAITQIEIEFAISYDVIQKQAICDAINHKIFILTGGPGTGKTT
VINGIIAVYALLNGLDLRKSHDLPILLAAPTGRAARRMNELTGLPSATIHRHLGMTGDDD
TSHLDDYLDADFIIVDEFSMVDTWLANQLLSNISSNSKLLIVGDADQLPSVSPGQVLADL
LKIPLLPQTKLEKIYRQSKDSTIVTLASQIQKGILPTDFIEKKADRSYFEARSEHIPQMI
ERIVEAAIRSGIPAQDVQVLAPMYRGQAGIDHINQLMQNLINPAEKEQLVFEATDCQYRQ
GDKVIHLVNDAESNVFNGDLGYITDLLPAKYTDSKQDELTINFDGNEIVYQRSEWYKIRL
AYAMSIHKSQGSEFPVVILPITSSSHRMLQRNLIYTAITRAKSKLILLGEKSAFDFAVKN
TGTARNTYLIQRFSDLLTDEKVIHTSVNNLETTVEKYILTEENFLKINPMIGITDEDIQS
VFGE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaattttacttttcaggcaccattgaacgcattatttttgaaaatcccagcagtttc
tttcggattctgctgttagatattgacgacaccgatgcagattttgatgattttgagatt
attatcacgggcaccatggcggatattatggagggcgaagactacactttttggggaaat
ctcgtgcaacaccctaaatatggtgaacaactcaaaataacacgctatgagcgtgcaaag
ccaaccagcaaaggcttagtcaaatatttttcaagcgaccattttaaagggattggtgta
aaaacagcgcaaaaaatcgtggatctctatggcgacaacgcgattgataaagtcttagca
gagccagaaaaattaaaggatattgcaggtctttctgctaaaaaccgtgaagcctttctc
acaaaactaagacaaaattacggcaccgagagaatccttgccaagctatctgaatacggt
atcccgaacaagcttgcctttcagattcaagatttttacaaagaagagactctcgaaatt
gtcgaacactatccttatcagttagtggaagatattcaaggaataggatttaaaattgcc
gaccaactggcgcaaagcttaggaattgaaagtactgctccagagcgcttccgtgcagga
ttactccacacacttctaatccagtccatggaaaaaggcgacacctatcttgaagctaag
gaattgctagagggcacgattgagctcctcgaaagttctcgtcagattgagttagactca
agttctgttgcggatgagctggcacatttgattgaagaagataaagttcaaaatgttgat
acaaagatttttgaaaacagtctcttttttgccgaagaaaggattcgcagcagtctccta
cgcattttagaaaaagggaagcaaaacaaatttgaaccgaaaaaaatcgaagctgctatt
acccaaatcgaaattgagtttgccatttcctatgatgtgattcaaaaacaagcgatttgt
gacgctatcaatcacaaaatttttatcctaacgggtggtcccggaacgggaaaaacgacc
gtcatcaatggaatcattgctgtttacgctctgctgaatgggttggatttgcgtaaatct
cacgatttgcctatccttctagcagctccgactgggcgtgctgccagacgcatgaatgaa
ttaacagggcttccaagcgctacgattcatcggcatttaggcatgacaggagacgatgac
actagccatttagatgattatttggacgcagactttattattgtcgacgaattttcaatg
gtagatacttggttagccaatcaactcctcagcaatatctcttccaacagcaaacttctc
attgtcggagatgctgatcagctgccttctgtcagccccggacaagtgctggcagattta
ctgaaaatccctcttcttccacagaccaaattagaaaaaatttatcgacaaagcaaagat
tccactatcgttaccttagccagtcagattcaaaaaggcatcctgccaactgattttata
gaaaaaaaggctgaccgttcttattttgaagcgcgtagtgaacatattccgcagatgatt
gaacgtattgtagaagctgctatccgcagtggcattccagctcaagatgtgcaggtactt
gcgcctatgtaccgcggacaggctgggattgaccacatcaatcaactcatgcaaaatcta
atcaaccctgctgaaaaagaacaactcgtctttgaagcaacggattgccaataccgacaa
ggcgacaaggtgattcatctggtcaatgatgcggaaagcaatgtgttcaacggtgacttg
ggttatatcaccgatttgctgccagcaaaatatacggactctaaacaggacgaattgact
atcaactttgacggcaatgagattgtttatcaacgcagtgaatggtataaaattcgtctg
gcatacgctatgagtatccacaaatctcagggtagtgaatttcctgtagtcattttaccg
attacatccagcagccaccgtatgctgcaacgcaatcttatctatactgctatcacccgt
gccaagagcaaattgattcttcttggggaaaagtctgcctttgactttgctgtcaaaaac
actggcacagctcgcaatacctatctaatccaacgcttttcagacctcctaactgatgaa
aaagttatacacacttctgtgaataatttggaaacaactgtggaaaaatatatcttgact
gaggaaaatttcttgaaaatcaaccctatgattggaataacggatgaggatattcaaagt
gtttttggagaatga
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