Streptococcus periodonticum: EHW89_08085
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Entry
EHW89_08085 CDS
T06568
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
spei
Streptococcus periodonticum
Brite
KEGG Orthology (KO) [BR:
spei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spei03019
]
EHW89_08085
Messenger RNA biogenesis [BR:
spei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EHW89_08085
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AZQ42402
UniProt:
A0A3Q9EZN5
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All DBs
Position
complement(1662308..1663252)
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AA seq
314 aa
AA seq
DB search
MKINQMKKDELFEGFYLIKSAELRQTRAGKNYLAFTFQDDTGTIEGKLWDAQPHNVEEFI
AGKVVHMQGRREVYNNTPQVNQITLRLPKVGEPNNPADFKEKPPVDVQELREYLAQMIFK
IENPVWQRVVRALYAKYDKEFYSYPAAKTNHHAFEAGLAFHTATMVRLANAIGEIYSQLN
KSLLYAGIMLHDLAKVLELTGPEQTEYTVRGNLIGHIALIDEEITKVLAELKIDDTKEDV
IVLRHVLLSHHGLLEYGSPVRPKIMEAEIIHMIDNLDAEMMMMTSALALVGEGEMTNRIF
AMDNRSFYKPNFDK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaaccaaatgaaaaaagacgagctgtttgagggattttatctcatcaaatcc
gctgaactacgtcagacaagggctggaaaaaattatttggcatttacctttcaagatgat
acgggaacgattgaaggaaaattatgggatgctcaacctcacaatgtagaagaatttatt
gctggaaaagtcgtgcacatgcaagggcgcagagaagtgtataacaacacccctcaagtc
aatcaaattaccttgcgattgcctaaagttggcgagccaaacaatccagctgattttaag
gaaaaaccaccagttgatgtccaagaactacgtgaatatctggcacaaatgatcttcaaa
attgaaaatccagtttggcagcgtgtggtgcgggctttgtatgctaaatacgataaagaa
ttttactcctatccagcagcgaaaaccaatcaccacgcttttgaggcaggacttgctttt
catacagctacaatggtgcggctggcaaatgccattggtgagatttactcgcaattaaat
aagagcttgctctatgcaggaattatgctccatgatttagcaaaggtgctggaattgaca
ggtccagagcaaacagaatacaccgttcgaggcaatctcatcggacacatcgctttgatt
gatgaagaaataacaaaggtgttggcagaattaaaaattgacgacactaaagaagatgtc
attgttctccgtcatgttttgctaagtcatcacggtttgttggaatacggtagtccagtg
cgtccgaaaatcatggaagctgaaattatccacatgattgataatttagatgcggaaatg
atgatgatgacttcggctctagccttggttggcgagggtgagatgaccaatcgaatcttt
gctatggacaaccgctctttctataagcctaattttgataagtaa
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