Solanum pennellii: 107001174
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Entry
107001174 CDS
T04130
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
spen
Solanum pennellii
Pathway
spen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107001174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107001174
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107001174
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
HECT type E3
107001174
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
107001174
NCBI-ProteinID:
XP_015054811
LinkDB
All DBs
Position
1:108593245..108604753
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AA seq
1893 aa
AA seq
DB search
METRSRKRAEATSSAPSSSSSGPTTRAAKRARVTAVSTSTSTVNSTPVAPTASISTRSRI
TTRSQDSLASSTPMDSTNESSGSASRNRRGKNPSHGSDKDNLDKGKEKEHEVRVRDKERD
RDAERILGLNIDSGGPGEDDDNDSEGGVGILHQNLNSASSALQGLLRKLGAGLDDLLPSS
GVGSASSSHQSGRLKKILAGLRADGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSFVPV
LVGLLNHENNPDIMLLAARALTHLVDVLPSSCAAVVHYGAVSCFVARLLTIEYMDLAEQS
LQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALATAANMCKKLPSDASDFVME
AVPLLTNLLQYHDAKVLEHASICLTRIAEAFASYPEKLDELCNHGLVTQAASLISTSNSG
GGQASLSTSTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSDLVATVSISPAL
SKPPEQIFEIVNLANELLPPLPQGTISLPTGTNLLIKGSAIKKSSASGSTKQEDMNPSSQ
EVSAREKLLNDQPELLQQFGMDLLPVLIQVYGSSVNSPVRHKCLSAIGKLMYFSGANMIQ
SLNNVTNISSFLAGVLAWKDPQVLVPALQVAEILMEKLPGIFAKMFVREGVVHAVDALIL
SPSLGSSTFQPSSAEKENDCIPGSSRSRRNRRRGSNSNADANSIEDPKSPVPGSGSPPNS
LEIPKTSSNLRIAVSAGAKSFKDKYFPSESGATEVGVTDDLLRLKNLCMKLNTGVDEQIS
KPKGKSKASVPRLGDISASKEDTLAELVASMLGELSKGDGVSTFEFIGSGVVAALLNYFT
CGYFSKERISDANLSRLRQQALRRYKSFISVALPSSVGGNMVPMTVLVQKLQNALSSLER
FPVVLSHSSRSSTGNARLSSGLSALSQPFKLRLCRAQGDKTLRDYSSNVVLIDPLASLAA
IEDFLWPRVQRVESGQKALASVGNSESGTTAAGVGASCPSTSTPASGSRRTRSRSAVNIN
DGAKKDSPQEKNGSSSKGKGKAVLKPAQEDGKGPQTRNAVRRRAALDKEAEVKPVNGESS
SEDDELDMSPVEIDDALVIEDEDISDDDEDDHDDVLGDDSLPVCTPDKVHDVKLGDSSED
SPATQTTNDNQTNAAGGSSSRAASAQGSDSVEFRSGSSYGSRGAMSFAAAAMAGLASANG
RGLRGARDRHGRPLFSTSDPPRLVFSAGGKQLNRHLTIYQAIQRQLVLDEDDEERYGGTD
FPSSDGSRLWGDIYTITYQRVDSQAERSTKGDGSSTSTKSNKASSSASASADPSLHQASL
LDSILQGELPCDMEKSNSTYNILALLRVVEGLNQLAPRLHVQSVIDDFSEGKILSLDELN
TTGVKIPSEEFVNSKLTPKLARQIQDALALCSGSLPSWCSQLTRSCPFLFPFETRRQYFY
STAFGLSRALYRLQQQQGADGNGSTNEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSS
QKAVLEVEYFGEVGTGLGPTLEFYTLLSRDLQKVGLRMWRTSSSSSEHSMEVGVDEKLSG
GDKELVQAPLGLFPRPWSSTVETADGNHFPRVIEYFRLLGRVMAKALQDGRLLDLPLSTA
FYKLVLGQELDLYDILSFDAELGKTLQELQALVSRKQNLESIGGQGQENINDLHFRGIPV
EDLCLDFTLPGYPEYVLKAGNENVDLCNLEEYVTLVVDATVRTGIGRQMEAFRSGFNQVF
EISALQIFSSTELDYLLCGRKELWKAETLVDHIKFDHGYTAKSPAIVYLLEIMGEFTPEQ
QRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSSASNTAPNGNMPSESADDDLPSVMTC
ANYLKLPPYSTKDIMYKKLLYAINEGQGSFDLS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccggaagcgggcggaggccacctcatcagcgccttcttcttcttcc
tctgggccaaccactcgcgccgctaagagagcccgtgtcaccgccgtttctacttctact
tccaccgtcaattccactcccgttgccccaactgcatcgatctctactcgttcccgcatc
acaactcgttctcaggactcactagcatcctctacacccatggactccaccaatgaatct
tctgggtcagctagccgaaaccgccgtggtaagaaccctagtcatggttccgataaggat
aatttggataaaggtaaggagaaagaacatgaggttagagttagggataaagaaagggat
agggatgccgagcggattcttggattgaacatagattctggtggtcctggtgaggacgat
gacaatgatagcgagggcggtgttgggattttgcaccaaaatttaaattcagcaagtagt
gctcttcagggactgcttaggaaattgggtgctggattggatgatttactccctagctct
ggcgtggggtcggcatcatcatcccaccaaagtggccggctcaagaagatattagctggt
ttaagggcggatggggaggaaggaaaacaggttgaagctttaactcagctgtgtgagatg
ctatccattggaacagaagactccctgtccacattttctgtggactcatttgtaccggta
cttgtaggactgctcaatcacgagaacaatcctgacattatgcttcttgcggcccgtgct
cttacccatttggttgacgttctaccttcttcctgtgctgctgttgtccattatggagct
gtttcatgctttgtagctcgcctgcttacaattgaatacatggacttggctgaacagtct
ttgcaagctctaaagaagatatctcaggaacacccaactgcttgtttgagggccggtgcg
ctgatggctgtgctttcttatctcgatttcttttctactggtgttcagagagtagcattg
gccactgctgctaatatgtgcaagaagcttccttcagatgcgtctgactttgtcatggaa
gctgttcctctcttaacgaatctcctccaatatcatgatgcaaaggtattagagcatgct
tctatctgcttgacccgtattgctgaagcatttgcgtcataccctgaaaagcttgatgaa
ctttgcaatcacggacttgttacccaagctgcctccctcatctcaaccagcaactctgga
ggtggacaggcttcactcagcacgtcaacctacacaggtttaattaggctactttcgaca
tgtgctagtggatctccgcttggagcaaaaaccttactgctgcttggaataagtggaata
ctcaaggatatactatcaggttctgatcttgtggccactgtgtctatttcacctgccttg
agcaaacctccggaacagatttttgagatcgtgaacctggcaaatgagctccttcctccg
ctgcctcaaggaaccatctctcttccaaccggcactaatttgctcattaaaggttctgct
ataaagaaatcttctgctagtggttctaccaaacaggaggatatgaatccatcttcccag
gaggtttcagctcgagaaaaattgttgaatgatcagcctgaacttctgcaacaatttgga
atggatcttcttcctgttctgatccaggtatatggatccagtgtaaatagtccagttcgc
cacaagtgcctctcagctattggaaagcttatgtatttcagcggtgcaaatatgattcaa
tctctaaataacgtcactaacatatcaagtttcttggctggagtattggcttggaaggat
cctcaagtgctggtgcctgctcttcaagtagcagaaatactaatggaaaagcttcctgga
atttttgccaagatgtttgtgcgagaaggtgttgttcatgccgtagatgctctgatattg
tctccctccctaggttcgtctactttccagccatcttctgctgagaaggaaaacgattgt
atacccgggtcatctcgttctagacgtaaccgacgtcgtggcagtaattcaaatgcagat
gcaaattccattgaggatcctaaaagtccagttccagggagtggatcaccaccaaattca
ctggaaataccaaagaccagttctaaccttcggattgcagtcagtgcaggtgccaaatct
ttcaaagataaatacttcccttcagaatccggggctactgaggttggtgttacagatgat
cttttacgattgaagaatctctgtatgaagttgaacactggtgttgatgaacaaatatct
aaacctaaaggaaaatcaaaagcttctgttcctcggcttggggatatttctgccagtaag
gaagacaccttggctgaactggtagcttccatgctgggggagctcagcaaaggggatggt
gtatcaacttttgagttcattggaagtggagtggttgcagctttgctgaactattttaca
tgtggatatttttcaaaggaaagaatctcagatgctaacttgtctaggcttcgacaacaa
gcactcagaagatacaagtcttttatttcagttgcccttccttccagtgtaggtgggaat
atggttcctatgactgttttggttcaaaagcttcaaaatgctttgtcttccttggagcgg
ttccctgtcgtcctgagtcattcttcaagatcatctactggaaatgcacgactttcttca
ggtttaagtgctttgtcacaaccattcaagctacgcctttgcagagctcaaggagacaag
acccttcgtgactactcttcaaatgttgtgttgatcgatcctttagccagtctagcggct
attgaagacttcctgtggcctcgagttcagagagttgagtctggtcaaaaggccttggca
tcagtaggcaactctgagtctgggaccaccgctgcaggggttggtgcttcatgcccatcg
acctctactcccgcttcgggatctcgtcgtacacgatctaggtcagcggttaatattaat
gatggtgcaaagaaagactcaccacaggaaaaaaatggaagttcatccaagggcaaaggg
aaggctgttctgaagcctgctcaagaagatggcaagggaccccaaacaagaaatgctgtt
cgaagacgagcagcattggataaagaagcagaagttaaacctgtgaatggggaatctagt
tctgaggatgatgagttggacatgtcacctgttgaaattgatgacgctttggttattgag
gatgaagatatatctgatgatgatgaagatgaccacgatgatgtgttgggtgatgattct
cttcctgtttgcacgccggacaaagttcatgacgtcaaattgggcgattcttcggaagat
agtcctgccacacagactacaaatgataatcagacaaatgctgctggtggttcaagcagc
agagctgcttctgctcagggatctgattctgttgagttcaggagtgggagttcttatggt
tcaaggggtgcaatgtcatttgctgcagctgccatggctggacttgcatctgcgaacggt
agaggtttgagaggagctagagatcgtcatggtcgccctttatttagcactagcgatcca
cccagacttgtattttctgctggtggaaagcagcttaatagacacttaactatctaccag
gccatccagcgccaacttgtccttgacgaggatgacgaagagaggtatggtggcactgac
tttccgtctagtgacggaagcagactttggggtgatatttacactatcacataccaaaga
gttgacagccaagcagagaggtctacgaaaggggatgggagctcaacttccaccaagtct
aataaagctagttcttcagcaagtgccagcgctgatccctcgttgcatcaagcatcattg
ttagatagtatattacagggagaacttccttgtgatatggagaaaagcaattctacttac
aacattttggcccttttacgtgtagtagagggattaaaccagctggccccacgattacat
gtgcagtcagttattgatgatttttctgaaggcaaaatattgagtttagatgagctcaat
actactggtgtcaaaattccctcggaggaatttgtaaacagcaagctcactccaaagttg
gcccgacagatacaggatgctctagccctttgtagtgggtctcttccatcatggtgttcc
cagttgacaaggtcctgtccgtttctttttccatttgagactcggcgccagtacttctat
tcaacggcctttggattatctagggctttatatcggcttcaacagcagcaaggtgcagat
ggaaatggatctaccaatgagagagaagtcagggttgggagactacagcgccagaaagtc
cgtgtctctaggaatcgtattctggattctgctgcaaaggtaatggagatgtactctagc
caaaaagctgttctcgaggtcgaatattttggtgaagttggaactggtttgggcccaact
ctggaattctataccctgttaagtcgggatctgcagaaagttggactgagaatgtggaga
acaagttcctcatcaagtgaacattcaatggaagtgggtgtggatgaaaaattgagtggg
ggtgataaagagcttgtccaagcacctcttggattattcccacgtccttggtcatcaact
gttgaaactgcagatggcaaccacttcccaagggtgattgaatatttcagattgctaggg
cgtgtgatggcgaaagcacttcaagatgggcggctattggatctccctctgtcaactgca
ttttacaagcttgttcttggccaagagcttgatctgtatgatattctttcttttgatgct
gagttagggaagactttgcaagagttgcaagctcttgttagccgtaaacaaaatctagaa
tcaattggaggccagggccaagagaacattaatgatctgcattttcgtgggatcccagtt
gaggatctttgtttagatttcacactcccaggctatcctgaatatgttctgaaagcaggg
aatgagaatgtggatctctgtaacttggaagaatatgttactttggtggttgatgccact
gtgaggactggaattgggcggcagatggaagcatttagatctggattcaatcaggttttt
gagatttcagctctgcaaatattctcttctactgagttggactacctgctttgtggccgt
aaagagttatggaaggctgagacgcttgtagatcatatcaagtttgatcatggatataca
gccaagagtcccgccatcgtatatttattggagatcatgggagagttcactcctgagcag
caacgagcattctgtcagtttgtgactggtgctccccggcttcctccaggtggtctggcc
gtgctcaatcctaagttgacaatagtgagaaagcattcatctagtgctagcaatacagca
ccaaatggtaatatgccatcagaatctgcagacgatgatttacctagtgtgatgacatgt
gctaactacctgaaactgcctccctattctactaaggatataatgtacaaaaagttgctc
tatgctatcaatgaaggtcaaggatcatttgatttgtcataa
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