Solanum pennellii: 107001312
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Entry
107001312 CDS
T04130
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
spen
Solanum pennellii
Pathway
spen00040
Pentose and glucuronate interconversions
spen01100
Metabolic pathways
Module
spen_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107001312
Enzymes [BR:
spen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107001312
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
107001312
NCBI-ProteinID:
XP_027767922
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Position
10:48531684..48534546
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AA seq
387 aa
AA seq
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MTSKSYFKIAFILGLIFVCTNAQEKVFNVHSYGAKADGRTDNSKAFLNGWRDVCKWNGKA
TLLIPLGEYVVNGAVFKGPCNGWDKTFEMRGVIKAPIDPKVFCNEYWILFKYIDGLKIKG
HGTFDGQGACAWGKHQCATLPYTVGFYFMNNFIVHDIHSINSKGVHMNIFSCSYGYFRHI
KISAPDESPNTDGIRIGNSNNIRIVDSNIGTGDDCIAMVAGSQSINITRVTCGPGHGISI
GSLGKLTKNDVVKDIHIKNCTFINTQNGVRLKTWALSMNGMATNIAFEDIIMIKSSNPII
IDQQYCPSGNCKKQGSLVQVKDVTYKNIRGSSSSKVAVILKCSASRPCKGIIFKDIDLVY
NGPATSSYCEHAIGKAIGIQLPPSCLI
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgacttccaagtcctatttcaaaatagcctttatattaggccttatttttgtatgcaca
aatgctcaagaaaaggtcttcaatgtccattcctatggtgctaaagcagatgggaggacg
gacaatagtaaggcatttttgaatggttggagggatgtatgcaaatggaatggaaaagcc
acattgttgatacctttaggggaatatgtggtaaatggtgcagtttttaaaggaccatgc
aatggatgggacaagaccttcgaaatgagaggagttattaaagctccaatagatccaaag
gtattctgcaatgagtattggattctttttaagtatatagatggcttaaagattaaagga
catggaacatttgatggacaaggggcttgtgcttggggaaaacatcaatgtgcaaccctt
ccctatacagttggattctatttcatgaataattttattgtgcatgacatacattcaatc
aatagcaagggtgtacacatgaacatcttcagttgcagttatggatattttaggcatatt
aagataagtgcaccagatgaaagccctaacactgacggcattcgtataggcaactcaaac
aacatccgtatcgtggattcaaacattggtaccggagatgattgtatagctatggtagca
ggtagtcaaagcatcaacattaccagagtcacttgtggccctggccatggaataagtata
ggtagcttaggtaaactaactaaaaatgatgttgtgaaggatatacacatcaaaaattgc
accttcatcaatactcaaaatggtgtgagacttaagacttgggcattgtcgatgaatggt
atggctacaaatatagcatttgaggatattatcatgataaaatcatcaaatcctataata
attgatcaacaatattgtccaagtggtaattgtaaaaaacagggaagcttagtgcaagtg
aaggacgtgacgtacaaaaacataagaggatcttcaagttcaaaagtagcagttatatta
aaatgtagtgcttcacgtccttgtaaaggaatcatttttaaagatatcgatttggtgtat
aatggtcctgcaacatcatcatattgtgaacacgccataggaaaagctatcggtatccaa
ttgcctccaagttgtttaatttaa
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