Solanum pennellii: 107001413
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Entry
107001413 CDS
T04130
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
spen
Solanum pennellii
Pathway
spen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107001413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107001413
03036 Chromosome and associated proteins [BR:
spen03036
]
107001413
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
107001413
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
107001413
RSF complex
107001413
WICH complex
107001413
B-WICH complex
107001413
NORC complex
107001413
BRF complex
107001413
NuRF complex (fruit fly)
107001413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
HDA2-3
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
107001413
NCBI-ProteinID:
XP_015054959
LinkDB
All DBs
Position
1:85805617..85817245
Genome browser
AA seq
1065 aa
AA seq
DB search
MARNTRAKSSSSEPLSDGSEEEQVNDLVNDEEDEEELEAVARSADDDGDDEAVADRDDGD
DDEDEEEDIAANEISKREKARLKDMQRRKKQKIQEMLDAQNAAIEADMSNKGKGRLKYLL
EQTELFAHFAKGDQSTSEKKTKGRGRHASKITEEEEDEEYLKEEDGGLSGNTRLLAQPSC
IQGKMRDYQLAGLNWMIRLYENGINGILADEMGLGKTLQTISLLAYLHEFRGITGPHMVV
APKSTLGNWMNEIKRFCPIIRAVKFLGNPEERRYIREDLLVAGKFDVCVTSFEMAIKEKS
ALRRFNWRYIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWALLNFLL
PEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVG
MSQMQKNYYRALLQKDFEVVNSGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEH
LIENAGKMVLLDKLLPKLKERGSRVLIFSQMTRLLDILEDYLMYRGHQYCRIDGNTGGED
RDASIEAYNRPGSEKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAQDRAHRIG
QKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAE
MVFSSKDSTITDEDIDRIIAKGEEATAALDAKMKKFTEDAIKFKMDDTADLYDFEDEKDE
NKADFKKIAGDNWIEPPRRERKRNYSESEYFKQTMRPSGPARPKEPRIPRMPQLHDFQFF
NTQRLSELYEKEVRFLMQAHQKNQLKDSIEVEEPEDVGDPLTADEQEEKDKLLEEGFSTW
SRRDFNTFIRACEKYGRSDIESIAAEMEGKTEEEVERYANVFKERYKELNDYDRIIKNIE
RGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYG
NWDELKAAFRTAPLFRFDWFVKSRTTQELARRCDTLIRLVERENQEFDERERQARKEKKL
AKNATPSKRAVARQAAKSPPTSKKRKQSSMDDFVSSAKRRSDGTT
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaacacgagagcgaaatcctcgtcgtcggagccattatcggacggttcagag
gaggagcaagtcaacgatctagtcaacgacgaagaagatgaggaggagcttgaagctgtc
gctaggtcagcagatgatgacggcgatgacgaagctgttgctgatagagatgacggtgat
gatgatgaagatgaggaggaagacattgcagctaatgaaatctccaagcgtgaaaaggca
cggttaaaagatatgcagaggcgtaagaagcaaaagatacaggaaatgttggatgcgcag
aatgctgcaatagaagctgacatgagtaacaaggggaaggggcgtcttaagtatcttttg
gagcagacagagttatttgcacattttgcaaaaggcgatcaatcgacttcagagaagaag
acaaaaggaaggggccgtcatgcgtcaaagataaccgaagaggaagaagatgaggagtat
ctcaaagaagaagatggtgggctgtccgggaatacacggctattggcacaaccctcttgt
attcagggaaagatgagggattatcaacttgctggtttgaactggatgatacggctatat
gagaacggcataaatgggatacttgctgatgaaatgggtcttggtaagaccttacaaacc
atctctttgctggcgtacctgcatgaatttagagggattactggtcctcacatggttgtt
gccccaaaatccacactaggcaattggatgaatgaaatcaaacgtttttgtcctatcata
cgtgctgtaaagttccttgggaaccctgaagaaaggagatacattcgagaggatttgcta
gttgctgggaagtttgatgtgtgtgtcacaagttttgagatggctatcaaagagaagtct
gctttacgacgctttaattggcgttacatcatcattgatgaggctcatagaatcaagaat
gaaaattctcttctttccaaaaccatgaggctctacagcactaattataggctgttgatc
acagggacgccacttcagaataatcttcatgagctctgggcgcttctgaactttttgcta
ccagagatttttagctcggctgagacatttgatgagtggtttcaaatatccggtgagaat
gaccagcaggaggtggtccaacagcttcataaggtccttcgtccattccttcttaggaga
ctgaagtctgatgttgagaaaggtctgcctccaaagaaggaaacaattctcaaggttggt
atgtctcagatgcagaaaaactactatcgggctttgttgcagaaagattttgaggttgtt
aattctggaggagagcgcaagcgtcttcttaatatagcaatgcagctccgaaaatgttgt
aatcatccatatcttttccaaggagctgagccaggacctccatatacaaccggagagcat
ctcatagaaaatgctggcaaaatggttcttcttgataagttgcttcctaagctgaaggaa
cgaggctcaagggttttaatattttcacagatgacacggctactggacatccttgaagat
tacctaatgtatcgaggtcaccagtattgtcggattgatggaaacactggtggagaagat
cgcgatgcttctattgaagcatataacagaccagggagtgaaaaatttgccttcttattg
tcaaccagagctggtggtcttggtatcaatcttgctacagcagatattgttattctttat
gacagtgactggaatccacaggttgatttgcaggctcaggaccgtgcccataggattgga
cagaagaaggaagtccaagtattccgtttctgcactgagtatacaattgaggagaaagtg
attgaaagggcttataagaagctggcacttgatgcgctggtcatccaacagggacgactg
gctgagcaaaaagctgttaataaggatgaactgctgcagatggtgcggtttggtgctgaa
atggttttcagttccaaagatagcactataacagatgaggatatcgatagaatcattgcc
aaaggagaagaggcaacagcagcacttgatgccaagatgaagaagtttacagaagatgct
atcaaatttaaaatggatgatactgctgatttgtatgactttgaagacgagaaggatgaa
aacaaggcagatttcaagaaaattgctggtgacaattggatagaacctccaagaagggag
agaaagcgcaattactcggagtctgaatatttcaagcaaaccatgcgaccaagtggtcct
gcaagacctaaagagcccaggattcctaggatgcctcagctgcacgactttcagttcttt
aatacccagaggctaagtgagctgtacgagaaggaagttcgttttctcatgcaagctcac
cagaaaaatcaattaaaagatagcatagaagtggaagagcctgaagatgtgggagatcct
ttaactgccgatgagcaggaagaaaaggacaaactattagaggaaggattttcaacatgg
agtaggagagatttcaatacttttatcagggcatgtgagaagtatggtcggagtgacata
gaaagtattgctgctgaaatggaaggaaagacagaggaagaggttgaaagatacgcaaat
gttttcaaagaaagatacaaagagctaaatgattatgataggattataaagaatattgaa
agaggagaggctagaatttcacgaaaagatgagatcatgaaagcaattgggaagaagttg
gaccgctacaagaatccatggttggagttgaagattcagtatggtcagaacaaaggaaaa
ttgtataatgaggagtgtgatcgtttcatgatatgtatggttcacaagcttggctatgga
aactgggatgagctaaaggctgcattccgaacagctcctttgtttcggtttgattggttt
gtgaagtctcggacaactcaagaacttgccagaagatgtgatacacttattcgtttggtg
gagagggaaaaccaagaatttgatgagagggagagacaggcacgcaaagaaaagaaactt
gcaaagaatgcgacaccatcaaagcgcgctgtggcaagacaagcagccaaaagccctccc
acctcaaagaaacggaagcagtcatcaatggatgattttgtgagctcggccaagagaaga
agtgatggtacaacctag
DBGET
integrated database retrieval system
