Solanum pennellii: 107001700
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Entry
107001700 CDS
T04130
Name
(RefSeq) general transcription factor IIF subunit 2-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
spen
Solanum pennellii
Pathway
spen03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107001700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107001700
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
107001700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Tau95
Motif
Other DBs
NCBI-GeneID:
107001700
NCBI-ProteinID:
XP_015055149
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All DBs
Position
10:complement(66190637..66191648)
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AA seq
276 aa
AA seq
DB search
MAEKITGANPKTTVHGFTTNNNLDTRNADRRVWLMKCPTVVSRFFEQHQHSTSGETDLSF
NPPRPVAKVTVVVDPLIANDSTQFTMELAGTSSGNMPTHYSMDMSTDFIPMSIFSESGQG
RVSVEGKIYHKFDMKPHHENIENYGKLCRERTNKYMTKSRQIQVIDNDNAKHMRPMPGFF
ATKASGSAAEKKKVPSKGLEMKRTRRDRDEMEEIMFKLFERQSNWTLKQLVHETDQPEQF
MKDMLKLLCIYNNKGAHQGTYELKPEYKRAEDKTDS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaaatcaccggagcgaaccctaaaaccaccgtgcacggttttacaaccaac
aacaatttggatacgagaaatgcagaccgacgtgtatggttgatgaaatgccctaccgtc
gtctctcgattcttcgaacagcatcaacactctacttccggtgaaactgatctttctttt
aatcctccgagacctgttgccaaagtcaccgtcgtcgttgatcctctaatcgccaatgat
tcaactcaattcaccatggaattggccggaacttcatctggaaacatgccgactcactac
tcaatggatatgtcaacagattttatcccaatgtcgatattttccgaatcgggtcaagga
agggtttcggttgaagggaagatatatcacaaatttgacatgaagcctcatcatgaaaac
attgagaattacgggaaattatgtcgagaaaggacgaataaatacatgacgaaaagtaga
caaattcaggttattgataatgataatgctaaacatatgaggcctatgcctggatttttc
gcaactaaggcttctggatctgctgcagagaagaagaaggtacctagtaaaggattagaa
atgaaaagaacaaggagagatcgtgatgaaatggaagaaattatgttcaaactctttgag
aggcaatcaaattggacgctgaaacagcttgtccatgagacggatcagcccgagcaattt
atgaaagacatgctcaaactactctgcatttacaataataagggtgctcatcaaggcact
tatgagctgaagccggagtataagagagcagaagacaagactgattcttga
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