Solanum pennellii: 107002044 Help Entry 107002044         CDS       T04130                                  Name (RefSeq) splicing factor 3B subunit 1   KO K12828   splicing factor 3B subunit 1 Organism spen  Solanum pennellii Pathway spen03040   Spliceosome Brite KEGG Orthology (KO) [BR:spen00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     107002044  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:spen03041]     107002044    03036 Chromosome and associated proteins [BR:spen03036]     107002044 Spliceosome [BR:spen03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     107002044  Complex B     107002044  Complex C    U2 SnRNP specific factors     107002044 Chromosome and associated proteins [BR:spen03036]  Eukaryotic type   Chromatin remodeling factors    B-WICH complex     107002044 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG Vac14_Fab1_bd ParcG Adaptin_N Motif Other DBs NCBI-GeneID:  107002044 NCBI-ProteinID:  XP_015055456 LinkDB All DBs Position 10:79125043..79129374 Genome browser AA seq 1259 aa AA seqDB search MDDEIQKTQEERKKMEQQLASMNTVTFDTEFYSSNKFEGYEKSIPVNDDDDTFDTENEVA RKMASFTAPKQFFKEVPRGAGEEDEPSGFNKPSKIIDREDDYRRRRLNRVISPERNDPFL DKTPGPEVRTYADVMREEALKRQKEELMKEIAKKKKEEQEKAADKKEEVEKPAQKRRNRW DQSQDEGGAKKAKAGSDWDQPDSTPGIGRWDATPTPGRVGDATPSVKKNRWDETPTPGRV ADSDATPAGGATPGATPAGMSWDATPKLAGLATPTPKRQRSRWDETPATMGSATPMSGAT PAAAYTPGVTPVGGVELATPTPGAINLRGPVTPEQYNLMRWEKDIEERNRPLTDEELDSM FPQEGYKILDPPASYVPIRTPARKLLATPTPIGTPLYAIPEENRGQQFDVPKEMPGGLPF MKPEDYQYFGSLLNEEDEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDAVYASYYT KEVMVVLIREFQSPDEEMKKIVLKVVKQCVSTEGVEPDYIRQDILPEFFRNFWVRRMALD RRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLGASDIDS RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSA KVRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAV VLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPILEDDENNVYSRPELNMFI NT seq 3780 nt NT seq  +upstreamnt  +downstreamnt atggatgatgagattcagaaaacgcaagaggagaggaagaagatggagcaacagctcgct tctatgaatacggtgacttttgatactgaattctatagttcgaataaatttgagggttat gagaaatctattccggtgaatgatgatgatgatacttttgatacggagaatgaggttgct agaaagatggcgtctttcactgcgccaaaacagttttttaaggaggttccacggggtgca ggggaagaggatgagcccagtgggtttaataagccgagtaagattattgatagggaggat gattataggaggaggaggttgaatagggtcatttctcctgagaggaatgatccttttttg gataagactcctgggccggaagtgaggacttatgcggatgttatgagggaggaggctttg aagaggcagaaggaagagttgatgaaggagattgcgaagaagaagaaggaagaacaggaa aaagcagcagataagaaggaggaggttgagaagccagctcagaagaggaggaataggtgg gaccaatcgcaggatgagggtggtgcgaagaaggcgaaagctggttcagattgggaccag ccggactcgacacctgggattggaaggtgggatgcaacccccacccccggcagggtcggt gatgcaacaccctctgtcaagaagaatagatgggatgagacacctacacctggtagggtt gctgattctgatgctacccctgctggtggtgctactccaggtgcaaccccagctggtatg tcttgggatgctacaccaaagcttgcaggtcttgctacccccacgcctaaaagacagagg tcaagatgggatgagactccagcgactatgggaagtgcaactcccatgtcaggtgctacc ccggcagcagcttatacaccgggtgttactcctgttgggggtgttgaactagctacacca acccctggtgccattaatttgcgtggcccggttactcctgaacaatacaatttgatgagg tgggagaaggacattgaagagagaaatcgacccttaactgatgaggagcttgactctatg tttcctcaggaaggttataagattttggatcctccagcgtcctatgttcccattagaaca cctgccaggaagcttcttgccacaccaacgccaatagggactcctctgtatgctattcca gaggaaaatcggggtcaacagtttgatgtaccaaaagaaatgccaggtggtttgccattt atgaagcccgaggattaccaatattttggttctttgttgaatgaggaagatgaagaggag ttgtctcccgatgaacagaaggagcgaaaaattatgaagcttttgctcaaggttaaaaat gggactccacctcagaggaaaactgctttgagacagctcactgataaggccagagaattt ggtgctgggcccttattcaatcggattctgccattgctcatgcagcctacactggaagac caagaaaggcatttgcttgttaaggttattgacagggtactgtataagttggatgaattg gttcgcccatatgtccacaagattcttgtcgtgattgaacctctgttgattgatgaagat tattatgctcgtgtcgaagggagggaaatcatatctaatcttagtaaggcagctggtttg gcgactatgattgctgccatgcgtccagatattgacaacattgatgaatatgtcaggaac acaactgctcgagctttcagcgttgttgcatctgcgcttggtattcctgctctgctgcca ttcttgaaagcagtttgtcagagtaagaaatcttggcaggctcgtcatacaggtattaag attgttcagcagattgctattcttattggttgtgctgttcttccacatttgaggtctctg gtggaaattattgaacatggtcttaatgatgagaaccagaaggttaggaccattacagct ctttctctggctgctcttgctgaagctgctgcaccatatggtattgagagttttgattct gttttgaagcccttatggaagggtattagatcacatcgtggcaaggttttggctgccttt ttaaaggctataggtttcatcattcctcttatggatgctgtatacgccagctactatacc aaagaagttatggttgtccttattcgtgagtttcaatcacctgacgaggagatgaaaaaa attgtgctgaaagtggtgaagcagtgcgtcagtacagaaggtgtggagcctgattacatt cgacaagacattcttccagaattcttcagaaacttttgggttagaagaatggctttggac cgcagaaactacaagcaactagttgaaaccactgtggagatagcaaacaaagttggtgtt gctgatatagttgggagaattgttgaagacttgaaagatgagagtgaaccatacaggaga atggtcatggagactattgagaaggtggttgcaaatcttggtgcatctgatattgattct cgactagaagagctgttaattgatggtatcctttatgccttccaagagcaaaccagtgac gatgccaatgtgatgcttaacggatttggtgctgttgtaaatgcccttggccagagagtt aagccataccttcctcagatttgtggtactataaaatggcgactgaacaacaagagtgcc aaggtgagacagcaagctgcagatctgatatccagaattgcagtagttatgaagcagtgt ggggaagaacaactaatgggccatcttggtgttgtcttgtacgagtacttgggagaagaa tacccagaggttttaggatctatactgggggctctcaaggctattgtgaatgttattggt atgactaaaatgactcctccaattaaggacttgcttcctcggttgacccctattttgaag aatcgtcatgagaaagtccaggagaattgtatcgaccttgttggtcgaattgcagaccgt ggtgctgaatttgttcctgcaagggagtggatgaggatttgttttgagcttcttgagatg cttaaagcgcacaagaaaggtatccgtcgagcaacagtgaatacatttgggtatattgct aaagcgattggacctcaggatgtgcttgcaacattgttgaacaatcttaaggtgcaggag cgtcagaaccgtgtctgtaccactgtcgctattgctattgttgcagaaacctgttctccc tttacagtcttgcctgccttgatgaacgaatatcgcgtgcctgagcttaatgtccagaat ggtgtcttgaaatccctctccttccttttcgagtacattggagaaatgggcaaggattat atatatgctgtaactccattactcgaagatgctcttatggacagagatctagtacacagg cagactgctgcctctgctgtgaagcacatggcccttggtgttgctggtcttggatgtgag gatgcacttgtccaccttttgaactatgtctggccaaacattttcgagacgtctccacat gtgatcaacgcagtcatggaagccatcgaaggaatgagggttgcactaggagcagccgta gtccttaactattgtctacagggattgttccatccagcaaggaaggttagagaagtttac tggaagatatacaactccctctatatcggcgcccaagatgcccttgtagcttcttatcct attcttgaagacgatgaaaacaatgtctacagtaggcctgagctgaacatgttcatttag

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