Solanum pennellii: 107002105
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Entry
107002105 CDS
T04130
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107002105
Spliceosome [BR:
spen03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107002105
Other components
Complex C specific factors
107002105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Mis12
BBS7_hp
Motif
Other DBs
NCBI-GeneID:
107002105
NCBI-ProteinID:
XP_015055504
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Position
10:complement(792866..795928)
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AA seq
866 aa
AA seq
DB search
MDDYQEMERFGMENDFEDGQWIGGEFYYRKRKEKKQVQTKDDTLYGVFASGDSDSDYEGS
SSKKRKKGFSSKPDLTKPVNFVSTGIVMPNKEIDQNSKEENEEQLMPEEENRGLGLGYGA
ASVGGLGFGTGSSSNSNSNADEVEADGGNFLPTAFGRKIKEGALRREKEREKEKSMLAKK
SSASESGRRETGGDVGGFEKFTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEAKLRPKNM
GMGFNDYKETSSAPALQESDGKQTVARPAILPVEGRSKEKLWSKQAKKVKKVYVTAEELL
AKKQEQGLETVQKVFDMRGPQVRVLTNLENLNAEEKARENDVPMPELQHNIRLIVDLAEL
DIQKIDSDLRNEMETVVALQKEKEKLQAEAARQKRQFDNMEEIVGVLDRIGEESTSGTLT
LDSLAKAFADLQQQYVEEYTLCNLSSIACSYALPLFIRIFQGWDPLQTPTHGLEVVSLWK
DLLQGNDIFAISDAASPYTQLFMEVVFPAVRISGTNTWQARDPEPMLRFLDSWEKLLPSS
VLQSILENIILPKLSAAVNSWDPRRETVPIHSWVHPWLPLLGQRLESCYHTIRSRFESVL
HAWHPSDMSAYYILSPWKTVFDATNWEKLMVRFIVPKLLAVMHEFQINPANQNLDQFYWV
RTWATAIPIHHMLPILDIFFNKWQEVLYHWLCSNPNFEEVTKWYLGWKELIPPELQANEH
IRYRLNLALEMMNRTVEGLEVVQPGLRENISYLRVLEQRQFETQKKAAVQAQSRPSVGSN
SGIQMDGGVDMSMKEVIEVHAQENGLLFKPKPGRMQDGHQIYGFGNISIIIDSLNQKVFA
QVEDRWSFVSLEQLLDLHNRSGSKRR
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaggagatggagaggtttggtatggagaacgattttgaagatggacag
tggatcggtggtgaattctactatcggaaacggaaagagaagaagcaagttcaaaccaag
gatgatacgctttatggtgtttttgcttctggtgatagtgattctgactatgaaggatca
tcctctaagaagcgaaaaaaaggtttctcatcgaaacctgacctaaccaaacctgttaat
ttcgtatcaactggaattgttatgcctaacaaagaaattgatcagaattccaaagaggag
aatgaggagcagctaatgccagaagaagagaatagaggtttaggattgggatatggggca
gcatctgttggcggccttggatttggtactggtagtagttcgaatagtaatagtaatgct
gatgaggttgaagctgatggaggaaactttctgcccactgcttttggtaggaagatcaaa
gaaggtgctctaagacgtgagaaggaaagggaaaaggagaagtctatgttggcgaagaaa
tcttcggcgtctgaatcagggagaagggaaactggtggtgatgttggtggctttgagaag
tttaccaaaggaatagggatgaagttgcttgagaagatgggttataagggaggtgggttg
ggtaaaaatgagcaaggaattgtggctccgattgaggcgaagctgagacctaagaatatg
ggaatgggatttaatgactacaaggagactagtagtgcaccagctcttcaagaatcagat
ggaaagcagactgttgctcgtcctgctatactacctgtagaaggtcgatcaaaagagaag
ctttggtcaaagcaagctaaaaaagtgaagaaggtttatgttacagctgaagagttgtta
gccaaaaagcaggagcaaggcctggaaactgttcagaaggtgtttgatatgagaggtcca
caggttcgagtcttgacgaatctggagaacttgaacgcagaagaaaaagcaagggagaat
gatgttcctatgcctgaacttcagcataatatcaggttgattgtggacttggcagaactt
gacatacaaaagattgatagtgatttgagaaatgagatggagacagttgttgctttgcaa
aaggagaaggagaagctccaagctgaggcagctcgtcaaaaaaggcagtttgataatatg
gaagagattgtaggtgtattggaccggataggggaagagagcacatctggtaccctgaca
ctagactcccttgcaaaagcatttgcagacttgcagcagcagtatgttgaggaatacaca
ctctgcaacttgtcaagcatagcgtgctcatacgctctgcctttgttcattcgaattttt
cagggatgggatccacttcaaactccaacacatggattggaggtggtttcactgtggaag
gatcttttgcaaggtaatgatatttttgctatctctgatgctgcatctccttatactcaa
ctatttatggaagttgtgttccctgctgttagaatatctggcaccaatacttggcaggct
agggaccctgaaccaatgcttcgttttttggattcttgggagaagctattgccttcttca
gttcttcagtcaatactggaaaacattattttgcccaagttatcagctgctgtgaactcc
tgggatccacgtcgagaaacagttccaatacattcctgggttcatccatggttgccctta
ttgggtcaaagattggaaagttgctaccacactattcgtagtagattcgaaagtgtactg
catgcttggcacccaagtgatatgtctgcatactacatactgtctccttggaagactgtt
tttgatgcaacgaactgggaaaaactaatggtccggtttatagttccaaagttgttagca
gtgatgcatgaattccaaataaatccagcaaatcagaaccttgatcagttctattgggtc
cgtacttgggctactgctattcccatccatcacatgcttccaatactggatatattcttt
aacaagtggcaagaagttttgtaccactggttatgctcaaacccgaactttgaagaagtc
acgaaatggtatttgggttggaaggaacttattccacctgagcttcaggcaaatgaacac
attcgctatcgactgaatcttgctctagaaatgatgaaccggactgttgaaggcttggag
gtcgttcagcctggtttgagggagaacataagttatcttagggttcttgaacaaaggcaa
tttgagactcagaaaaaagcagcagtacaagctcaatcccgcccttctgtgggctcgaac
agtggtatccaaatggatggtggggttgacatgagcatgaaagaagttatagaagttcat
gctcaagagaatggtttgctgttcaagcctaagcctggcaggatgcaagatggtcatcag
atatatggttttggtaacatcagtattattatagattctctcaatcagaaggtatttgca
caagttgaggacaggtggtcttttgtgtcacttgagcagctgttggacctgcataatcga
tctgggtcaaagcgtcgatag
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