Solanum pennellii: 107002146
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Entry
107002146 CDS
T04130
Name
(RefSeq) replication protein A 32 kDa subunit B-like
KO
K10739
replication factor A2
Organism
spen
Solanum pennellii
Pathway
spen03030
DNA replication
spen03420
Nucleotide excision repair
spen03430
Mismatch repair
spen03440
Homologous recombination
spen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107002146
03420 Nucleotide excision repair
107002146
03430 Mismatch repair
107002146
03440 Homologous recombination
107002146
03460 Fanconi anemia pathway
107002146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spen03032
]
107002146
03400 DNA repair and recombination proteins [BR:
spen03400
]
107002146
DNA replication proteins [BR:
spen03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107002146
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107002146
MMR (mismatch excision repair)
107002146
DSBR (double strand breaks repair)
HR (homologous recombination)
107002146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
TrmB
Motif
Other DBs
NCBI-GeneID:
107002146
NCBI-ProteinID:
XP_015055539
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All DBs
Position
10:79689925..79694275
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AA seq
279 aa
AA seq
DB search
MYGGNNQFDGNAAFSGGGFMPSQATQTVGDHSFSPAKNRDSQTLIPLTVKQISEAFQSSD
DKTNFLVDGVDVNNVKLVGILCNKVERVTDVSFGVDDGTGRLDCFRWVNEAVDTKEMEAV
TNGMYVRVHGHLKGFHGKKQLMAYSVRPVDDYNEIAYHFAQVIYVHSYNSLRKQHDSSSM
PSQVPSSAFNTPLKGYQASASNQFPGYSMDGIRGVDKMVLDYLQQPSCLALEKGVHRNQL
VQQLQLPSEKISEALDSLESEGLIYTTIDEFHYKSTGNG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcgggaacaatcaattcgacggcaacgcggcgttttccggcggaggtttcatg
ccgtcgcaggctactcaaaccgtcggtgatcattctttctctccggccaagaatcgtgat
tcacagactttgattccattaaccgtcaagcaaattagtgaagcctttcaatcaagtgat
gataagacaaattttctcgttgacggagttgatgtgaataatgtaaaactggtgggtatt
ttatgcaacaaagtggaaagggttacagatgtatcatttggggtggatgatggaacaggg
cgccttgactgttttcgatgggtaaatgaagctgttgataccaaggaaatggaagcagtc
acaaatggcatgtatgttcgagtccatggacacttgaaaggctttcacggtaaaaagcag
ttgatggcttactcagtcaggcccgtggatgactacaatgagattgcataccactttgct
caagtcatttatgttcatagctacaacagtctacggaagcaacatgatagttcctctatg
ccatctcaagtgcctagctcagctttcaacactcctctaaagggataccaagcttcagcg
tcaaatcaatttcccggatacagcatggacgggatcagaggtgtagataagatggtcttg
gactacttgcaacaaccgtcatgccttgcacttgaaaaaggggttcatcgcaatcagcta
gtccaacagctacaactcccttcagagaagatctcagaagctcttgactctctcgaatca
gaaggtctaatttacaccacaatagacgagtttcactacaagtctactggaaacggttga
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