Solanum pennellii: 107002171
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Entry
107002171 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107002171
KO
K19022
AP-5 complex subunit beta-1
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spen03400
]
107002171
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
107002171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
107002171
NCBI-ProteinID:
XP_015055571
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All DBs
Position
10:complement(78116796..78121341)
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AA seq
1130 aa
AA seq
DB search
MSPELKPLSAQEWENLIDDYNHGGSRRLRWTSINYAAVPLLDLTLSSLLRKDIPHNLKLQ
LLIFIEEHFSTDENDIVSPNFLSRLLEALRSVIQSPNDGVSTSFALKEQFLISSTSIFVN
YVSYTSSCLDSSFVTPLESLIELLLTIINRPNHSVDRQTRSIACECLRELETAFPCLLSE
IGSHLWSLCQNERTHASQSYALLLATVVHNIARLKPTVSFSNSSTLVPFSVPRFLVDENV
KNGHFQGELSDLSNRELRRVVAFLLECPQNLTPWGLLEFMDKTLPVAAVLDLQPSLLKVQ
FSGLLHTYDPLLWHAYLVMYLSYMDSFVGQEMEIASRLLLLSKESQHHLFFRLLVLHWLV
GFIGLVLKRDFEKRKNVVDMSLSFYPSVFDPLALKSLKLDLLAYCSVLIDNDDGVRSSKG
SPQMTREKLFEDGLVCVSAFKWLPPWSTETSVAFRAIHKFLIGQTSHSKSDSISNKTLLE
PAIYHTVQRSLIDSLSEYRGLVPVIVSFTDRLLTCYKHQFFGERLLKTFDDNLLPKLKID
YKLVSYFCILERIGESDKVSPSGLIELLTKFMVVLVEKHGPDTGLRSWSHGSKVLGICRT
MIMHHYSSKLFVGLSRLLSFTCLYFPDLEVRDNARIYLRMLICVPGKKLRDILNSGDLLP
GISPSSHSSSFFSVQSPRLSHDPKKSRNISSCVHLERMVPLLVKQSWSLSLPALGFDSKK
PSYIEPIKDNASPSEQSEFDKSTDDTVISEANRHNQPPEPLRVMDSKISQIVEILRKHFS
FIPDFRHMPGAKIKISCALRFESEPFSRIWGNNMPANGVDTLPALYASVLKFSSSAPYGS
IPSCHVPFLLGQPPKGFYSFSQTNSLDIIPVEDVSETPGDDKSFKAPVLIELEPQDPIPG
FVDVFIETNADNGQIIRGQLHNITVGIEDMFLKAIVPDDIPEDAERNYYVDLFNALWEAC
GTSTSTGRETFVLKGGKGVAAISGTRSVKLLEVPVTSLIQAVERSLARFIVCVTGDSLTN
LMKEGGVIRDITWDEIHLSSSSTDDTIGETSLVGGPLYLKYKDDEDDGGGGYVQISKKNL
GIIQILIFLPPRFHLLFQMEVSNTSTLVRIRTDHWPCLAYVDDYLEALFS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccggaactcaaacccttatcggcgcaagaatgggaaaatctaatcgacgattac
aaccacggcggttcacggcggctccggtggacttccatcaactacgccgccgttcctctt
cttgacctcacactttcatcacttctccggaaagatatccctcacaatctcaaactccag
ctcctcatcttcatcgaagaacacttcagcacagacgagaacgacatcgtttcacctaat
ttcctcagccgtctcctcgaagcactccggtcagtaatccaatcaccaaacgacggcgtt
tcaacgtcgttcgctctcaaggaacagtttctcatctcctcaacttcaattttcgttaat
tacgtgagttatacatcgagttgtctcgattctagctttgttactcctcttgaaagttta
attgagcttttgttgactattattaaccggccgaatcatagcgttgaccggcaaactcga
tcaattgcttgcgagtgtttacgtgaattagaaactgcttttccttgtttactttcggaa
attggatcacatttgtggagtttgtgccaaaatgagcgtactcatgcttcccaaagctac
gcattattgttagcaactgttgttcataacattgctagattaaaacctactgtttcattc
agtaattcttcgacgttggttccgtttagtgtacctaggtttttggttgatgaaaatgtt
aaaaatggacattttcaaggggagttatcggatttgagtaacagggagttgaggagagtt
gttgcttttttgcttgaatgtccacagaatttgactccttgggggttattggagtttatg
gataagacattgccagttgctgcagtattggatttgcagccatctttgttgaaggttcag
ttttcaggattgcttcatacatatgatccattgctatggcatgcatatttagttatgtac
ttaagctatatggattctttcgtagggcaagagatggaaattgcgagtcgactgttgttg
ttatccaaagaatctcagcatcatttgttttttcgattgttggtgctgcactggttagtt
gggttcatagggttggtattgaagagggattttgagaaaaggaagaatgttgttgatatg
agcttgagcttttacccatcggtgtttgatcccctcgctttgaaatcattgaagcttgac
ttgcttgcctattgttcagttttgattgataatgacgacggagtaaggagttcaaaaggc
agtccacaaatgactcgggaaaagttatttgaagatggccttgtttgtgtatcagctttt
aaatggttgcctccttggagtacggaaacttctgtggcattccgtgcaatccataagttt
ttgatcggtcagacatctcactcaaaaagtgattctatctccaataaaacccttttggag
ccagcaatctaccacactgtgcagagatcacttatagactctttgtctgaatatagagga
ttggtccctgtcattgttagcttcacagaccgcttgttgacatgttacaaacatcaattt
tttggagaacggctacttaagacatttgatgataacttgcttccaaaactcaagatagac
tacaaattggtatcttacttctgtatattggaaaggattggtgagagtgataaagtttca
cctagtgggttaatagagctccttaccaagttcatggtagttcttgttgaaaaacatggt
ccagatacaggattaaggtcttggagtcatgggagtaaagttcttggaatttgtcgaact
atgatcatgcatcactatagttccaaattatttgttgggctgtctcgtcttttatcattc
acttgtctttacttcccagatctggaggttcgtgataatgccagaatttacctgcggatg
ctgatttgtgttcctgggaaaaagttaagagacattctaaacagtggggacttgcttcct
ggaatttctccatctagccattccagctctttcttcagtgttcagtctcctagactttct
cacgaccccaagaaatctaggaatatttcatcctgcgtgcatcttgagcgcatggtgcca
ttgttggttaaacaatcttggtctttgtccctgccagccctgggatttgattccaagaaa
cctagttatatagaacccatcaaggacaacgcatccccaagtgagcaaagtgagtttgac
aaaagtactgatgatacagtgatctctgaagctaatcggcacaatcagcctccggagcca
ttacgtgttatggattcaaagatttcacagatagttgaaatcttgaggaaacatttttca
tttattcccgacttcagacacatgcctggtgccaagatcaaaatatcctgtgctttaagg
ttcgagtcagagcccttcagtcgcatttggggaaacaatatgccagctaacggagtcgat
acccttcctgccttatatgcatctgttctcaagttctcttcttctgcgccgtatggctcc
attccatcatgccacgttccttttcttctaggtcaaccccccaaaggtttctactctttt
agccagacgaattcccttgatatcatccctgtggaagatgtttctgaaactcctggagat
gacaaaagcttcaaagctcctgttctgattgaattggaaccacaggatccaatacctggt
tttgttgatgttttcattgaaacgaatgcggataatggtcagatcattagaggccagctg
cataacattacagtaggaattgaagatatgtttctcaaagctattgttccagatgacatc
cctgaagatgcagaacgtaattactacgttgatctgtttaatgctttgtgggaagcatgt
ggcacttcaaccagcactgggcgggagacatttgtacttaaaggaggcaaaggggtcgca
gcaatcagtggtactcgctccgtgaaattactagaggttcctgtgacatctttgatccaa
gccgtagagcgatccttggcacgttttatagtatgtgtaaccggtgattctctaaccaac
ctcatgaaggagggaggagttataagagacataacatgggatgagattcacttgagttcc
tcttccaccgatgataccatcggggaaaccagtttagttgggggacccctttacctcaag
tacaaggatgatgaagatgatggaggaggaggttatgtccaaattagtaagaaaaaccta
ggcattattcagattttgatattccttcctccaagatttcacctcctttttcagatggaa
gtctctaatacctccacactcgttcgaattcgaacagatcactggccatgcctagcttat
gttgatgactatttagaagctttgttttcctaa
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