Solanum pennellii: 107002173
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Entry
107002173 CDS
T04130
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit E
KO
K03250
translation initiation factor 3 subunit E
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
spen03012
]
107002173
03051 Proteasome [BR:
spen03051
]
107002173
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107002173
Translation factors [BR:
spen03012
]
Eukaryotic type
Initiation factors
eIF-3
107002173
Proteasome [BR:
spen03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
107002173
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107002173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3_N
PCI
EIF3E_C
RPN7
TPR_9
TPR_19
TPR_20
COG6_N
FKS1_dom2
Mce4_CUP1
TPR_14
Motif
Other DBs
NCBI-GeneID:
107002173
NCBI-ProteinID:
XP_015055573
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All DBs
Position
10:complement(78142449..78146599)
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AA seq
438 aa
AA seq
DB search
MASKYDLTPRVAQQLDIHLIFPLLEFLQEQGLYPDEYILKAKIELLNHTNMVDYAMDIHK
SLYHTDDVPQEMMERRAEVVARLKALEEAAAPLITFLQNSSAVQELRADKQHNLQLLQER
YQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSDRSVSALWGKLAAEILMQN
WDIALEELNRLKEIIDSKSFSTPLNQVQNRIWLMHWSLFIFFNHDNGKTLIIDLFNQDKY
LNAIQTSAPHLLRYLAIAFIVNKRRRPQFKDFIKVIQQEQHSCKDPITEFLACIYVNYDF
DGAQEKMKECEELILNDPFLGKRAEEGSFSSVPLRDEFLENARLFISETYCRIHQRIDMG
VLAEKLNLNLEEAERWMVNLIRTSKLDAKIDTETGTVTMEPNQPNVYEQLIDHTKPLSGR
TYKLVSQLLEHAQTQLAR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaagtacgatttgacgccacgtgtagcgcagcaattggacattcacttgatt
ttcccgttactggagtttttgcaagagcagggattatacccagatgaatatatactcaag
gcgaagattgagctgctcaatcacactaacatggttgattatgctatggatattcataag
tctctctatcataccgacgatgtacctcaagaaatgatggagaggagagctgaggttgtg
gcaaggttgaaagcacttgaggaagctgcagccccattgatcacttttttgcagaattcc
agtgctgtgcaggagttgagagctgacaaacagcacaatcttcagttgctccaggagcgg
taccagattggtccagaccagatagaggcattgtatcaatatgccaaatttcagtttgaa
tgtggaaattactctggtgctgctgattatctttaccagtaccgagcattgtgcacaaac
agtgacaggagcgtgagtgcattgtggggaaagcttgcagcggagatactaatgcagaat
tgggatattgcactcgaggaactcaaccgcttgaaagaaattatcgactcaaagagtttc
tctactccgttgaatcaagttcagaatagaatatggctaatgcattggagtctattcatc
ttcttcaaccatgacaatggcaagacactgatcattgacctgtttaaccaggacaaatac
ttgaatgccattcaaacaagtgctccccacttgctgcgatacttggctattgcatttatt
gtcaacaagagaagaagacctcaatttaaggactttataaaggttattcagcaggagcaa
cactcttgcaaagatcccatcacagagtttttggcatgtatttacgtcaactatgatttt
gatggggcacaggagaagatgaaggagtgcgaagagctaatattgaatgacccattcctt
ggaaaaagagctgaagagggcagtttctcctctgtgccattgagagatgaattccttgaa
aatgctcgtctttttatctctgagacctactgccgcattcaccaacgcattgacatgggg
gttctagctgagaaacttaacttgaaccttgaggaggcagagcgatggatggtgaatctt
atcaggacctcaaagcttgatgccaagatagacactgaaaccgggacagttacaatggaa
ccaaatcagcctaatgtgtacgagcagctcatcgatcacaccaagcccctttctggacgc
acgtacaaattagtcagtcagcttcttgaacatgcacagacacaacttgctagatag
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