Solanum pennellii: 107002179
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Entry
107002179 CDS
T04130
Name
(RefSeq) YTH domain-containing protein ECT4-like
KO
K20102
YTH domain-containing family protein
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107002179
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107002179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
ANAPC_CDC26
Motif
Other DBs
NCBI-GeneID:
107002179
NCBI-ProteinID:
XP_015055580
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Position
1:complement(47761090..47765466)
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AA seq
706 aa
AA seq
DB search
MAAGAPPADQAADLLQNLSLDSRNKTLEIADTKKKPSGNPTDGANGQLQSADRSVTPVLP
EFMDPNLCYVPNSYASTAYYYGYDASANEWEDYARYTNPDGVEMPGVYGDNSSLIYHHAY
GYAPYSPYSPATSPVPTVGHDGQLYGSQQYHYPYFQPLPLTSTSNTTSAALPKGEIATSA
AAADQTSLSVDSAKGNSNVIANGGVKGNTGHMHVRPAFQNSSLNANGSYGPGTLPGGAAS
GYQDPRLGFDGVRSPIPWIDGSMFTDGQTRPVVNNSFTPSFSNGYAAPSTKNQNVHPHVM
GMHHPRSSSSVNTTNGYMNRMYPNKYYGQFGNTFNSGMGFGPNRYDTRATGRGGWMTVDN
RSKPRGRGNSFYGYGNENMDGLNELNRGPRGKGSKNQKCFTPVALAVKGQNIPLAVTKDA
EEDKPSLIPDREQYNHPDFPVTYADAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDA
AYQETQQNSGGCPVFLFFSVNTSGQFVGVAEMVGPVDFNKNVEYWQQDKWVGCFPVKWHI
VKDVPNSLLKHITLENNENKPVTNSRDTQEVKVEQGLQVLKIFKDHISKQCILDDFEFYE
DRQKRIQDKKAKQQLFQKQSQVWEGKATTEEKNRDHSKVDLKSQKPTEVSACLNKENLPA
AAQTSTVEVKLTEIVPVTKTGDDVKDVKPVTVSEKKPVANGASNGC
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggtgctcctcctgctgatcaagctgcagatttgctgcagaatttgtcactg
gattctcggaataagactcttgaaattgcagacacaaaaaagaagccttctgggaaccct
acagatggggcaaacggtcagcttcagtcggctgatcggtctgtgacacctgtgttgcca
gaattcatggatccaaatttgtgctatgttcctaacagttatgcctcaacagcatactat
tatggatatgatgcttctgctaacgagtgggaggactatgcacgatatacgaatccggat
ggagttgagatgcctggagtttatggagacaacagttcacttatctatcatcatgcctat
ggatatgcaccctatagtccatattcacctgctacttcgcctgtccctaccgtggggcat
gatggccaactttatggatcgcaacaatatcactatccgtatttccagccactccccctg
accagtacttcaaacactacttcagctgccctgccaaaaggtgagattgccacttctgca
gcagctgctgaccaaacatcattatctgtggattctgctaaagggaactcaaatgtcatt
gcgaatggtggtgtaaagggaaatactgggcatatgcatgtgaggcctgcattccagaat
tcatccttaaatgctaatggctcttatggacctggcacattgccaggaggagctgcttca
ggttatcaggaccctagactgggttttgatggtgtgcgttctcccattccatggattgat
gggtcaatgttcactgatgggcaaactaggccagtggtgaacaattcttttacgccatca
ttttcaaatggctatgctgctccatcaacaaagaatcagaatgttcatccacatgtaatg
ggcatgcaccacccaaggtcttcatctagtgtgaacacaactaatgggtatatgaatagg
atgtatcccaacaaatattatgggcagtttggtaacacatttaattctggcatggggttt
gggcctaaccggtatgatactcgcgctacaggtcgtggtgggtggatgacagttgataac
aggtctaaacccaggggtagaggaaatagtttctatggctatggcaatgaaaacatggat
ggtttaaatgagctcaacaggggaccgagaggtaaaggatccaagaatcagaagtgtttt
acaccagttgctctggcagtcaaggggcagaacatccctcttgctgtaaccaaagatgcc
gaggaagataaaccaagcctgattcctgacagagaacaatacaaccatccagattttcca
gtgacatatgctgatgccaagttctttatcatcaagtcttacagtgaagacgatgtgcac
aaaagcatcaaatataatgtgtgggctagcacaccaaatggcaacaagaagcttgatgct
gcttaccaagagactcaacaaaattctggaggctgcccagtttttcttttcttctcggta
aatacaagtgggcagtttgttggtgttgcagagatggtagggccagttgatttcaacaag
aatgtggagtattggcagcaagacaagtgggtcggctgttttcctgtcaagtggcacatt
gtgaaggatgtaccaaatagcttgttgaaacacatcacactggaaaacaacgagaacaag
cctgttacgaacagcagagatactcaggaggttaaagtggagcagggtctgcaagtgctc
aagatatttaaggatcatattagcaaacagtgtatccttgatgattttgagttctatgag
gatcgtcagaagagaattcaggataagaaggccaagcaacagctattccagaagcagtct
caggtatgggaaggtaaagctactactgaagagaagaacagagatcattcaaaggttgat
ctcaagtcacaaaaacctacagaagtttcagcttgtttgaacaaagaaaatttacctgct
gctgcccagactagcactgtggaagtcaagcttaccgaaattgtaccagttacaaaaact
ggagatgatgtgaaggatgttaaaccagtcactgtatcagaaaagaaacctgtagcaaat
ggggcttctaatggatgctaa
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