Solanum pennellii: 107002216
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Entry
107002216 CDS
T04130
Name
(RefSeq) transcription factor IIIA
KO
K09191
general transcription factor IIIA
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107002216
03021 Transcription machinery [BR:
spen03021
]
107002216
Transcription factors [BR:
spen03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107002216
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
107002216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
Zap1_zf1
zf-met
zf-H2C2_2
zf-C2H2_jaz
ROS_MUCR
zf-C2HC
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
107002216
NCBI-ProteinID:
XP_015055634
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All DBs
Position
10:76690504..76693113
Genome browser
AA seq
372 aa
AA seq
DB search
MGEVGEEKREVVFRDIRRYYCEFCGLCRSKKSLISSHIQSHHQDEIESRKDDATENAKGS
KMNICEECGATFQKPAHLKQHMQSHSLERPFVCHIDDCQSSYRRKDHLSRHLLLHQGKLF
ECPVDGCKSTFSFQGNMTRHVKEMHDQPASADVDLPKEYVCSEAGCGKVFKYASKLRKHE
DSHVQLETVEAMCLEPGCMKHFTNEKCLKEHIESCHQHIDCEICGTKQLKKNIKRHLRTH
EEGPTSERIKCEFQDCPHTFSTRSNLAQHIKAVHVGSKPFSCSISGCGMKFAFKHVRDKH
EQSGCHIYTPGDFEEVDEQFLSRPRGGRKREPTLFESIMRKRITPPSGIDPVFNQTPEYL
SWLRSMESDNQM
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagtcggagaagagaaaagagaagtagtatttagagacattagaagatattac
tgtgaattttgtggcctttgccgttcgaagaaatccttaatttcctctcatattcagtct
catcatcaagatgaaattgagagccggaaagatgacgcaactgaaaatgcaaagggctca
aaaatgaatatttgtgaggaatgtggtgcgacttttcagaagcctgctcatttgaagcag
catatgcaaagtcattcactcgagaggccattcgtatgtcatatagatgactgccagtct
agctaccgtagaaaggatcacttgtcgagacatctcttgctgcaccaaggaaagttgttt
gaatgtcctgttgatgggtgcaaaagcacattcagttttcaaggcaacatgactcggcat
gtcaaagagatgcatgaccaacctgcctctgcagatgttgatcttccaaaggaatatgtc
tgctctgaagctggatgtggaaaggtgtttaaatatgcatccaaattaaggaaacatgaa
gactctcatgttcagctggagactgtcgaggctatgtgtttagagccagggtgtatgaaa
cacttcacaaacgagaaatgcctcaaggaacacatagagagttgccaccaacatattgat
tgtgaaatatgtgggaccaaacaattgaagaagaatattaagcggcatcttcgcacacat
gaagaagggcctacatcagagagaataaaatgtgaattccaggattgcccgcacaccttc
tccacaaggtcaaatcttgctcaacacatcaaagccgtgcacgtgggatctaaaccattc
tcatgtagcatatctggttgtggtatgaaatttgccttcaaacatgtgagagataaacat
gaacaatcaggctgccatatttatactcctggagattttgaagaggttgatgagcaattc
ctatctagaccaagaggcggtagaaagagagaacctactcttttcgagtcaattatgcgg
aaaagaattacaccacccagtggtatagatcctgtgttcaatcagacaccagaatatctc
tcatggttacgctccatggaatcggataatcaaatgtga
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