KEGG   Solanum pennellii: 107002223
Entry
107002223         CDS       T04130                                 
Name
(RefSeq) protein SMG7-like
  KO
K14409  protein SMG7
Organism
spen  Solanum pennellii
Pathway
spen03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107002223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107002223
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     107002223
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107002223
SSDB
Motif
Pfam: EST1_DNA_bind EST1
Other DBs
NCBI-GeneID: 107002223
NCBI-ProteinID: XP_015055643
LinkDB
Position
10:78827318..78835650
AA seq 967 aa
MAIQMDSSLDHSSRERVQRLFNKNVELDNKRRKAAQARVSSDPNAWQQMRENYEAIILED
HAFSEQHEIEYALWQLHYRRIEELRARFNAAIASSGSTSQTGKGPPRNGSDNFIKIRTQF
KTFLSEATGFYHDLMVKIRAKYGLTVGGFSDDPGDQIPSSNEANKSIEVKKGLVSCHRCL
IYLGDLARYRGLYGEGDSKARDLAAASSYYTQASSLWPSSGNPHHQLAILAFYSSDELVA
IYRYFRSLAVENPFTTARDNLIIAFEKNRQYFSQLPVDAKASSTKVTPSRTTGRGRGKYE
TRPSLKDGKVEASLPKEKALSTSEIFKTFSTGYVRLNGILFTRTSLETFDEVLLMVKNDL
LELLSSGSDEKYNFGSTAADCRLAIVRLVAILIFTIHNVIRENDNQSYAEILQRSVLLQK
AFTAAFEFMGHLVERCIQLKDPSSSFLLPGILVFVEWLACHQDIALGNESEENQARARSF
FWKNCISFFNKLMSTGSKFVDEDEDETCFFNMSRYDEGETGNRLALPEDFELRGFVPLLP
AQLILDFSRKCSFGGDSGSKEKKCRLQRMIAAGKVLATVVRVGEEGIYFDTRGKKFIIGM
EPQTSDNYLLNGLNDTKLSGIELESPDAGQLTVGDLLPKQQLYVECEEEDEVIVFKPSVI
EKSNDISSSTMTSAVPVSGISVVNASSGASMECVDSCCEMGPFPSALDGLRLQNGWSTTR
LPTSISLTNTQYMQAIQPSTSMWSVEQGAFMNGLGGLSLTGNGLMTEAELLNHPEMVSPA
AAHSAPLPQSVKFSTANNIHFQVPEAAMSSTFSSLAPSVAFSDSMSMKSLAITPTGMKKN
PVCRPGRHLGPPPGFGSVSSKVDDSSFASTLKNENNPIPRMDDYSWLNGYQLPSAHQSIV
YKNSDNHSAQPYHSVSNSSLVGISFPFPGKQVPSLHMQSDIQKANNQSVGLPQQYQGQSL
WQDRFFV
NT seq 2904 nt   +upstreamnt  +downstreamnt
atggccattcagatggatagcagtttagatcattcctcacgggaacgcgttcagcggctt
ttcaacaagaatgtggagctggataacaagcgtaggaaagcagcacaagctagagtatct
tctgaccccaacgcatggcaacaaatgcgtgaaaactatgaagctatcatccttgaggat
catgctttttctgaacaacatgaaatagagtacgccttgtggcagttgcattatagaaga
attgaagaactgcgtgcacgcttcaatgctgcaatagcttcaagtggatcaacctctcag
actgggaaaggtccacctcgtaacgggtcggataacttcataaagatccgcacgcagttc
aagacttttctgtcagaagcaactggcttttatcatgatttgatggtgaaaatcagggca
aagtatggcctgacagtaggaggtttctctgatgatccaggggatcagattccttcttct
aatgaagctaataagtctattgaggtgaagaaaggcttggtatcctgccatcgttgtttg
atttatctgggtgatcttgctcggtacagaggcttatatggtgagggtgactctaaagct
cgtgaccttgcggcagcatcaagttattacacgcaagcttcttcactgtggccatcaagt
ggcaaccctcatcatcagcttgcaatattggccttctattccagtgatgagttggtggca
atctatcggtattttcgtagtcttgcagtagagaatccttttacgactgcaagggacaac
ctgatcattgcatttgagaagaatcgtcaatatttctcccagctgccagtggatgctaag
gcttcgtctaccaaggtaactccttcccgaacaactggtagaggacgaggtaaatatgaa
acaaggccgtctctgaaagatggaaaggttgaggcaagtttaccaaaggaaaaagcatta
agtacatctgaaatcttcaaaacctttagcacagggtatgttcggttgaatggcattctc
ttcacgcgcactagcttggagacctttgatgaagtgttgttgatggttaagaatgatctg
cttgagcttctctcttctgggtctgatgagaagtataattttggttcaactgctgctgac
tgcagactggcaattgtcaggctcgtggccatcttaatattcaccatccataatgtgatt
agggaaaatgataatcagtcatatgccgagattctacaaagatcagttcttctgcagaag
gcatttactgctgcttttgagttcatgggtcatctggtcgagagatgtatccaattaaag
gatccctcatcaagcttcttattgcctggtattttggttttcgtagaatggttagcctgc
catcaagatattgcacttggtaatgaatcagaggaaaaccaagctagggctagatccttt
ttctggaagaactgtataagtttctttaataagctaatgtcaactgggtctaagtttgtc
gatgaagatgaagatgaaacatgctttttcaatatgagcaggtatgatgaaggtgagact
ggcaatcgtcttgcgttgccggaagactttgaactcagaggatttgttcctcttcttcca
gcacagcttatccttgacttctcaaggaaatgttcttttggtggtgatagtggaagtaaa
gagaagaagtgccgtcttcagaggatgattgcagctggaaaggttcttgctactgtggtc
cgggttggagaagaaggaatatattttgacacaaggggaaagaaatttatcattggtatg
gagccccaaacttctgataattatctacttaatggcttaaatgataccaaattaagtggt
attgaactggaaagtccagatgctggacagttgactgtgggagatcttctgccgaagcag
caattgtatgtggaatgtgaagaagaagacgaagttattgtttttaagccatcagtgata
gaaaaatctaatgacatctcttcaagtactatgacctcagcggttcctgtatctggtatt
agtgttgtcaatgcttcttctggtgctagcatggagtgtgttgattcgtgttgtgagatg
gggccatttccatctgcactcgatggattgaggttgcagaatggttggagtactacaagg
ctgccaacaagcatttctcttactaatacccaatatatgcaggcaatccaaccaagtact
tcaatgtggtctgtagagcaaggtgcttttatgaatggattgggtggcttgagcttgaca
ggaaatgggctaatgacagaagctgagttgctaaatcatccagaaatggtgtcacctgca
gcagcacattcagctcctttgccacagtctgtgaagttcagcactgcaaataatattcac
ttccaggttcctgaggctgctatgtcatctaccttcagttcacttgcaccctccgtagct
ttctccgatagcatgtcaatgaaatctttagcaattactccgacaggaatgaagaaaaat
ccagtgtgccgacctggtaggcatctgggtccacctccagggtttggttctgtttcttcc
aaagtagatgactcttcatttgcctcgacacttaaaaatgaaaataaccccatccctcgt
atggatgattatagctggttgaatggatatcagttaccttcagcacatcagagcattgtt
tacaaaaactcggacaatcattcagctcaaccatatcactctgtaagcaatagtagctta
gtcgggattagctttcctttcccagggaagcaggtgccctctctgcacatgcagtcagat
atccagaaagcaaataaccaatctgttggattgcctcagcagtatcaaggacagtccctg
tggcaagatcgtttctttgtgtga

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