Solanum pennellii: 107002405
Help
Entry
107002405 CDS
T04130
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
spen
Solanum pennellii
Pathway
spen03015
mRNA surveillance pathway
spen04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107002405
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107002405
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spen01009
]
107002405
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107002405
03036 Chromosome and associated proteins [BR:
spen03036
]
107002405
Protein phosphatases and associated proteins [BR:
spen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107002405
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107002405
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107002405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
107002405
NCBI-ProteinID:
XP_015055906
LinkDB
All DBs
Position
10:complement(80551235..80557718)
Genome browser
AA seq
492 aa
AA seq
DB search
MLKNIIKRGHKKVLKSEVSDFGHAPPAGGRNSGNVSTSDVVVNHASRGNMVTNSIQSQQT
PSVMTSAAPASGNIENLPLFRDVQISERQVLFFRKLQICCFQFDFTDTMKLVREKEIKRQ
TLVELVDYVQSGAGKISESNQEEMVKMIAGNIFRCLPPASHENTGSENVEQEEDEPCLEP
SWPHLQLVYELLLRYVVSSDTDTKLAKRFIDHSFVLKLLDLFDSEDPREREYLKTILHRV
YGKFMVHRPFIRKGINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVR
ALIPLHKPKSVAMYHQQLSYCIVQFVEKDYKLSDTVIRGLLKYWPVTNCQKEVLFLQELE
EVLETTQAAEFQRCMVPLFRQIARCLNSPHFQVAERALFLWNNEHIVGLIAQNRNVIFPI
IFDALQKNIDNHWNQAIHGLTVNVRKMFMEMDAELFDECQRQYSEKAARATELEEQRELR
WQRLAAAATQGR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaaatatcataaagcgagggcataaaaaggtgcttaaatcagaagtatctgat
tttggtcacgcgccgccggcgggaggaaggaattccggcaatgtttcgacgtctgatgtg
gtggtgaatcatgcttcgagaggaaacatggtaacgaattcgattcaatcacaacagaca
ccttcagtgatgacatctgcagctccagcatcgggaaacattgagaatcttcccttgttt
cgtgatgtgcagatatctgaacgtcaagtgttgttttttaggaaactacagatttgttgt
tttcagtttgattttactgataccatgaaattggtaagggagaaagagataaagaggcaa
acacttgtggagcttgtagattatgttcaatctggtgctgggaaaatcagtgaaagtaat
caagaagaaatggtaaagatgatagcagggaatatatttcgttgtttacctccggcatct
catgagaatacaggatccgaaaatgtggaacaggaagaggatgagccatgtctcgagcca
tcttggcctcatttacagcttgtgtatgaattgctgttgaggtatgtggtttcatcagat
actgacacaaagttagctaaacgctttattgatcactcatttgtattgaagttattggat
ttgtttgattccgaggacccaagggaaagagagtatttgaaaacaatacttcaccgtgta
tatgggaagtttatggtgcatagaccatttataaggaagggaatcaataacatcttttat
aggtttatttatgagacagaaaggcacagtgggataggtgagttactagaaattctaggg
agtattataaatggttttgcattacccatgaaagaggaacacaagctattccttgttcgg
gcactcataccactgcacaagccgaaatcagttgcaatgtatcatcagcagttatcctac
tgtattgttcagtttgttgaaaaggattataagttgtctgatacggttataaggggtttg
ttgaaatactggcctgtcactaattgccaaaaagaagtcctctttcttcaggagcttgaa
gaagtgttggagaccacacaggcagcagaatttcagcgttgcatggttcctctttttaga
cagattgctcgttgccttaacagcccacacttccaggtagcagaacgagccctatttcta
tggaacaatgagcacatagtgggattgatcgcccagaaccgcaatgtcattttcccgatc
atttttgatgctctgcaaaagaacatagataatcattggaatcaggctatccatgggctg
actgtaaatgttcgcaaaatgttcatggaaatggatgctgagctgtttgatgagtgccaa
agacagtattctgagaaagcagcccgggccactgaactggaagagcagcgagaattaaga
tggcagagattagcggcagctgcaacacaaggacgttaa
DBGET
integrated database retrieval system
