KEGG   Solanum pennellii: 107002527
Entry
107002527         CDS       T04130                                 
Name
(RefSeq) glycine-rich RNA-binding protein 4, mitochondrial-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
spen  Solanum pennellii
Pathway
spen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107002527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107002527
   03041 Spliceosome [BR:spen03041]
    107002527
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107002527
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107002527
Spliceosome [BR:spen03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107002527
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 107002527
NCBI-ProteinID: XP_015056068
LinkDB
Position
10:79190452..79194091
AA seq 259 aa
MAFFNKAGSILRQAVSKQHINHEISASKPSIFQLIRCMSSKLFVGGISWNTNDNSLQEAF
SKYGEVVEARIIYDRESGRSRGFGFVTFNTSEDASAAIQALDGQELDGRRIRVNVANDRT
RGYGGGGGGYGGGNYGGGGGYGGGGNYGSGGYGGGGGNYGSGGGNYGASGYGSSGNYGSA
GGVDANVASSYGSGESNFGFGTSGDNYASGSTDAASNSFSFGNDATSNQAEASDVNSPVD
AGENYRDDNDSSDYADRRA
NT seq 780 nt   +upstreamnt  +downstreamnt
atggctttctttaacaaagctggaagcattcttcggcaggctgttagcaagcagcacatc
aatcacgaaatatctgcatccaagccttcaatttttcaacttattagatgcatgtcttca
aaactttttgttggaggaatctcatggaacacgaatgacaactctctccaagaagctttc
agcaagtatggagaagtcgttgaagcaagaatcatttacgatcgtgagtctgggagatct
aggggatttggcttcgttactttcaatacttctgaggatgccagtgctgccatccaggct
ttggacggacaggagcttgatggtcgtaggattagagtaaatgtagcgaatgacaggaca
agaggatacggcggcggcggtggtggttatggtggcggtaactatggaggtggtggtggt
tatggtggcggcggcaattatgggtctggtggttatggtggtggtggtggcaattatggg
tctggtggtggtaattatggtgcctctggttatggtagcagtggcaattatggcagcgca
ggtggtgttgatgctaacgtcgccagcagttatggaagcggagaaagcaattttggcttt
ggcacaagtggtgataactatgccagtggaagcactgatgctgctagcaacagcttcagc
ttcggcaacgacgctaccagcaaccaagcagaagcttctgatgttaatagcccagttgat
gcaggtgaaaattacagagatgacaatgactccagtgattatgcagatagaagagcctaa

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