Solanum pennellii: 107002551
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Entry
107002551 CDS
T04130
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107002551
03036 Chromosome and associated proteins [BR:
spen03036
]
107002551
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107002551
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107002551
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107002551
microRNA pathway
RISC loading complex
107002551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
107002551
NCBI-ProteinID:
XP_015056100
LinkDB
All DBs
Position
1:3316384..3324600
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AA seq
909 aa
AA seq
DB search
MAEGETNGAAAEGLPPPPPVPPDFTPAKTEIEPVKKKILRVPMARRGVGNKGQKIQILTN
HFKVNVNNVDGHFFHYSVALFYEDGRPVDGKGVGRKVLDTVHETYDTELAGKDFAYDGEK
SLFTIGALPRNKMEFTVVLDDVISNRNNGNSSPGGHGSPNEADRKRLRRPYQSKTFKVEI
SFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFVD
VGAGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFSLDWAKA
KRVLKNLRVKTSPTNQEYKITGLSDRPCREQLFTLKQKGKDADGEVQTTEVTVFDYFVNH
RNIELRYSADLPCINVGKPKRPTFFPIELCSLVSLQRYTKSLSTFQRSSLVEKSRQKPQE
RMQVLSNALKINQYDAEPLLRSCGISISNNFTQIEGRVLPPPKLKTGGDDFVPRNGRWNF
NNKRLVDPTKIERWAVVNFSARCNVQGLVSDLIKCGKQKGIMVEDPFDVFEESPQVRRAP
PLVRVEKMFEQVQSKLPGAPKFLLCLLPERKNCDVYGPWKRKNLAEYGIVTQCIAPTRVN
DQYITNVLLKINAKLGGLNSMLTVEHSPAIPMVSKVPTIILGMDVSHGSPGQSDVPSIAA
VVSSRQWPSISRYRASVRTQSPKVEMIDNLFKRTSDTEDDGIMREALLDFYVSSGKRKPE
HIIIFRDGVSESQFSQVLNVELDQIIEACKFLDEKWSPKFVVIVAQKNHHTKFFQPNDPN
NVPPGTIIDNKVCHPRNYDFYLCAHAGMIGTTRPTHYHVLYDELGFSADDLQELVHNLSY
VYQRSTTAISVVAPICYAHLAATQMGQWMKFEDASETSSSHNGVTNAGPVSVPQLPKLEE
KVSSSMFFC
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggagaaacaaatggagcagcagcagagggtctgccacctcctccccctgtt
ccaccagatttcactcctgctaaaactgaaattgagcctgtgaagaaaaagatcttgcgt
gttcccatggccaggcgtggtgttggaaataagggacagaagattcaaatacttactaat
cactttaaagtgaatgtaaacaatgtggatggacacttcttccactacagtgttgcctta
ttctatgaagatggtcgaccagttgacgggaagggagttggaaggaaggtgttagacaca
gtgcacgaaacttatgatacagaattagctggaaaggacttcgcctatgatggtgaaaaa
agcttgtttaccattggagcactccctaggaataaaatggagttcactgttgtccttgat
gacgtgatatcaaataggaacaatggtaacagcagccccggtgggcatggtagtcctaat
gaagctgacaggaagaggttacgtcgtccttaccagtcaaaaactttcaaggtggagatc
agttttgctgccaaaatcccgatgcaggcgattgcaaatgctctgcgtggtcaagagtca
gagaactctcaagaagccttgcgagtcttggatataattttgaggcagcatgctgcaaag
cagggttgcctgcttgttcgacaatccttttttcacaatgatcccaagaactttgttgat
gtcggtgctggtgttcttggttgtcgaggattccattccagcttccggactacccagagt
ggcttgtctttgaacattgatgtgtctacaacaatgattatccagcctgggcctgtcgtg
gacttcttgattgcaaatcaaaatgcgaaggatcccttttcactggattgggcaaaggca
aaacgtgtgctcaagaatttgagggtgaagacatcccccactaatcaagagtacaagatt
actggactgagtgaccgcccttgtcgtgaacaactatttaccctgaagcagaaaggaaaa
gatgcagatggtgaggtccaaactactgaagttactgtttttgattactttgtcaaccac
cgcaacatagagttgcgttattctgctgatttaccctgcataaatgttgggaaaccaaag
cgtcccacctttttcccgattgagctctgttccttggtgtctttgcaaagatacacaaaa
tccttgtccacattccagaggtcttcactagtggagaaatcaaggcaaaagcctcaggag
aggatgcaagtcttaagcaatgctctcaaaatcaaccaatatgatgctgagcctctgctt
cgttcctgtggaatatccattagcaataacttcactcagattgaaggacgtgttcttcca
cccccaaagctgaagacgggcggtgatgactttgtccctcgtaatggcagatggaatttc
aataataagagactagttgatcccactaagatagaacgctgggccgttgtcaatttttct
gcacgctgcaatgtacaagggctagtcagtgatctgatcaaatgtggaaaacagaaagga
attatggtggaagacccatttgatgtctttgaggagtctccacaagtcaggagggcccca
ccacttgtgagggttgagaagatgtttgagcaggttcaatccaagctacccggggcacct
aaattcctgctttgtttgcttcctgagaggaaaaactgtgatgtatacggaccatggaag
cgaaagaatcttgctgagtatggcattgttacccagtgtatagctccaacaagagtcaat
gatcaatatatcaccaatgtgctcctgaagataaacgcgaagcttggaggtttaaactct
atgttaactgttgaacattctcctgcaatccctatggtgtctaaggtccctaccattatt
cttgggatggatgtgtcccatggctctcctggccaatctgatgtcccttcaattgcagcg
gttgtcagttcaaggcagtggccatcaatatctcgttacagagcttcagttcgtactcag
tctcctaaagtggagatgatagacaacttgtttaaacgtacctctgatactgaagatgat
ggaataatgagggaggcgttgctagatttttatgtgagctctggaaaaaggaagcccgag
catataataatattcagggatggtgtcagtgaatctcagtttagtcaagttctgaatgtt
gagctggaccagattattgaggcttgtaagtttcttgatgagaagtggtcaccgaagttt
gtggtgatagttgcccagaagaaccatcataccaagtttttccagcctaatgatcctaac
aatgttcctccaggcacaatcatagacaacaaagtctgtcacccaaggaattatgacttc
tacctgtgtgctcatgctggaatgattggtacaactcgtcctactcactatcatgtcttg
tatgatgagctgggtttctctgctgatgatcttcaagagcttgttcataatctctcttat
gtgtaccagagaagcaccactgcaatatctgttgttgctcctatctgttatgcccatctt
gctgctactcaaatgggacagtggatgaagtttgaagatgcatcagagacttcctcaagt
cataatggagtaaccaatgctggaccagtctccgttcctcagcttccaaagctcgaggag
aaagtttccagttctatgttcttttgctaa
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