Solanum pennellii: 107002596
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Entry
107002596 CDS
T04130
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107002596
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
107002596
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Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
DER1
CUE
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
107002596
NCBI-ProteinID:
XP_015056155
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Position
10:78868979..78875357
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AA seq
293 aa
AA seq
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MNVGPSGFNNAPVTRALVIACTIFTIIFGVRGRGNQLGWSYQDIFQKLQIWKLIISAFTF
SSTPELVFGLYLLYYFRVFERQIGSNKYSVFLLFSFVVSLLLEVLALQLIKDPSLSILSG
PYGLIFSSFVPFYLDIPVSTRFRLFSLNFSDKTFIYLAGLQLLFSSWKRSIVPGLCGIIA
GCLYRLNFCRIRKVKFPEFITSFFARLSWPSMGNLPPPSAPARNAPGNVPIFAGRQMEGN
YPAPVSSTPEPPEDAISMLVSMGFDRNSARQALIHSRNDVNIATNVLLESQSH
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcggaccatctggtttcaacaacgcaccagtgacaagggcattggtaattgcg
tgtactatcttcaccatcatatttggtgttcgtggtcgtggaaatcagctgggatggtct
tatcaggatatcttccagaagcttcaaatctggaagctgatcatatcggcttttaccttt
tcttctacccctgaactagtatttggattatatctgctgtactacttccgtgtcttcgag
aggcaaatcggttcaaacaaatattctgttttcctgctgttctcttttgtggtctcttta
ttacttgaggttcttgctctacaacttattaaagatccttccttgagtatcctgtctggg
ccctatggactaattttttcttcctttgtgcccttttatctcgacattccggtttctacc
cggttccgcttatttagtctcaacttctctgacaagacttttatttatttagctggcctc
cagcttcttttctcatcctggaaaagatctattgtacccgggctctgtggaataattgca
ggttgcttgtatcgtttaaacttttgccgtattaggaaagtgaagttcccagaatttatt
acatccttctttgctcgactttcttggccatcgatgggtaacctgccaccgccttctgca
ccagcaagaaatgctccaggaaacgtaccaatctttgctggtcgccaaatggaggggaac
tacccagctccagtttcatccaccccagaaccaccagaagacgctatttctatgctggta
tcgatgggctttgataggaactcagcaaggcaggcactcatccattcaagaaatgatgtt
aatatagccacaaacgtccttctcgagtcgcaatcacactga
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