Solanum pennellii: 107002607
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Entry
107002607 CDS
T04130
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107002607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107002607
Spliceosome [BR:
spen03041
]
Common components
Common spliceosomal components
SR proteins
107002607
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_3
SET_assoc
RNA_bind
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
107002607
NCBI-ProteinID:
XP_015056177
UniProt:
A0ABM1FFL1
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All DBs
Position
10:3565538..3568657
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AA seq
239 aa
AA seq
DB search
MRPIFVGNFEFDTRQSELERFFSKYGRIERVDMKSGYAFIYFEDDRDAADAIRGTDNMPF
GYERRRLSVEWAKGERGRHHDGGPKSGGNQRPTKTLFVINFDPIRTRVRDIEKHFEPHGK
VLHVRIRRNFAFVQFENQEEATRALECTHMSKVLDRVVSVEYALKDDDERGNKYNSPRRD
YGRQRDSPYRRSPSPVYRRNRPSPDYGRPRSPVHNGPSYDRYRSPQYGRYRSRSPVRRS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctatttttgtcgggaactttgagtttgatactcgtcagtcagaactggaacgg
tttttttccaagtatggaagaattgagcgagtcgacatgaaatctgggtatgcttttatc
tactttgaggatgaccgagatgcagcagatgcaatccgtgggactgacaacatgccattt
ggttatgaaaggcgccggctctccgtggaatgggcaaaaggtgaacgtggtaggcatcat
gatggtggccccaagtctggtggaaaccagagaccgaccaaaacattgtttgtaattaat
tttgaccctattcgtactagggtccgagacatagagaaacactttgaacctcatggcaaa
gtccttcatgttcgcatccgccgcaactttgcgtttgtgcagtttgaaaatcaggaagaa
gccacaagagctttggagtgtacacacatgagtaaggtcctggatagagtggtttctgtg
gagtatgcattgaaggatgacgatgagaggggtaacaaatataacagccctagacgagat
tatggcaggcaaagggatagtccttatcgaaggtcaccaagtccagtgtatcgtaggaac
cgaccgagtcctgattatggccgacctcggagtcctgttcataatggtccatcatatgac
agatacaggagtccacagtatggaaggtatcgcagcaggtctcctgttcggaggtcttga
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