KEGG   Solanum pennellii: 107002630
Entry
107002630         CDS       T04130                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
spen  Solanum pennellii
Pathway
spen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107002630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107002630
   03041 Spliceosome [BR:spen03041]
    107002630
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107002630
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107002630
Spliceosome [BR:spen03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107002630
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 107002630
NCBI-ProteinID: XP_015056205
UniProt: A0ABM1FFN7
LinkDB
Position
10:complement(79305898..79308737)
AA seq 407 aa
MGTKRKSSSSTSRPQPEEPKPEIQPQSSSEEEEELEEVEYEEDPEESESDLDFGSDGEDE
ETKRYTIRKLLEPFSKDQIIQQFRTAASKDPSILSRLTSFADSDPTHRKIFVHGLGYDAT
SEQLLDAFKPYGKIEECKLITDKVTGRAKGYGFVVFETRVGAARALKEPQKKIGNRTTSC
QLAALRPGTGQDSGGRKIYVGNVGQDVDGEKLRAFFAKFGEIEEGPSGIDSVSGKFKGFA
IFVYKSVEGANKALEEPQKLFDGCQLFCKKFVENLNNAGSSNANQGVQQNEMSYGFGVTP
GILSGASMNALPLLIGQNMGFGINPLLAPGFNPLFGGIGAGYGMNGISPIVIASFGSDPA
LQGLGPYQGLQMWQPSFGGSAAMATRTTPADDSSGAGGVTYPSSLGR
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggggactaagagaaaatcatcatcttcaacctcaaggccccaacctgaagaaccaaaa
cctgaaattcaacctcaatcttcatctgaagaagaagaagaattggaagaagtagagtat
gaagaagatcccgaagaatccgaatccgatctagatttcggttccgacggagaagatgag
gagactaagcgatatactattagaaaacttcttgaaccattcagtaaagatcaaataatc
cagcaattcagaaccgcagcttcaaaggatccatcaattctttctcggctcacatctttt
gccgattccgacccgacccaccggaaaatcttcgttcatggactggggtatgatgcaact
tcagaacaattgctcgacgcctttaaaccctatggaaaaatcgaggagtgtaagctgatt
actgataaggttacaggaagagctaaagggtacgggtttgtggtattcgaaacacgggtc
ggggcagcaagggctttaaaggagccccagaagaaaattgggaatcgtactacttcttgt
cagctggctgctttgcgacctgggactggtcaagattccggtggccggaaaatttatgtt
gggaatgtcgggcaggatgtggatggtgaaaagttacgagcttttttcgcgaaatttggt
gaaattgaggaagggccatcagggattgatagtgtcagtgggaagtttaaggggtttgct
atatttgtgtataagtctgttgaaggggctaataaggcgttggaggaaccgcagaaattg
tttgatgggtgtcaattgttttgcaagaaatttgtggagaatttgaacaatgctggtagt
agtaatgcaaatcaaggtgtgcagcagaatgaaatgagttatggttttggcgtgactccc
gggatattgagtggcgcgagtatgaatgctctgcctcttttgatagggcaaaacatgggg
tttggaatcaacccgttgcttgcaccaggatttaatccgttgtttggagggattggtgcc
ggttatggtatgaatggcattagtccgattgtcatagctagttttggttcagacccagca
ttgcagggattagggccttatcagggtctacaaatgtggcagccttcttttggagggtca
gcagcaatggcaacaagaactacacctgcagatgattcatccggggcaggaggggtgacc
tatccctcgtctctgggccgctag

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