Solanum pennellii: 107002646
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Entry
107002646 CDS
T04130
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
spen
Solanum pennellii
Pathway
spen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107002646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107002646
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107002646
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
107002646
NCBI-ProteinID:
XP_015056234
UniProt:
A0ABM1UXI9
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All DBs
Position
10:complement(964415..972427)
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AA seq
317 aa
AA seq
DB search
MTNLPQSPSVGVSSSSRGSMSSSSSSEGAPVNRDRQMQSAQQLVLDICNPNLRENALLEL
SKRREIFEDLAPVLWHSFGTIAVFIQEIISVYPVLSPPNLTPAQSNRVCNVLALLQCVAS
HPDTRMLLLHAYVPLYLYPFLNTTIRSTPFEHLRLTSLGVIGALVKVDNTEVISFLVSTE
IVPRCLCSMEMGSELSKTVATFIVQKILLDDVGLKYICTTSDRFFEVAQALGNMVGALAQ
QPSSRLLKYIIRCYLRLSDEPRACQALKNCLPDRLRDDTFSSCLSEDPTTRTWLQQLLLN
VNGNQVAPEAGGFDWMP
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacttacctcagtctccctcagtcggtgtcagcagttcctcaagaggtagtatg
tcatcatcgtcttctagtgaaggagcaccggtcaatagggatcgccaaatgcaatctgct
caacagcttgtgcttgatatctgcaacccgaatcttcgtgaaaatgctcttctggaactt
tccaagaggagggaaatttttgaggatttggccccggtattatggcactcttttggtacc
attgctgtatttatacaggagataatttctgtctaccctgttttgtcaccgccaaacctg
actcctgcacaatccaatagagtttgtaatgtactagcacttcttcagtgtgtagcctct
caccctgacaccagaatgttgttactccacgcatatgttcctttgtatctgtaccccttt
cttaatacaacaatcaggtcaacaccatttgaacatttgaggcttacaagcttaggtgtt
attggtgcccttgtgaaggtagacaacactgaagttatcagttttcttgtttcgacagag
atagttcctcggtgcttatgctcaatggagatggggagtgaactatcaaaaacagttgcg
actttcattgtgcaaaaaatccttctagatgatgtgggtctgaagtacatctgtaccacg
tcggataggttttttgaagtagctcaagctttagggaatatggtcggtgcgcttgctcag
cagccttcatcaagattgctgaaatacataatcaggtgctatcttcgtttatcagatgag
ccaagggcttgtcaggcactgaaaaattgtcttcccgataggcttagagatgacaccttc
agcagttgtcttagtgaggatccaacaacgagaacgtggctgcagcaattgctccttaac
gttaatgggaatcaggttgccccagaagctggaggatttgattggatgccgtga
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