Solanum pennellii: 107002772
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Entry
107002772 CDS
T04130
Name
(RefSeq) histone acetyltransferase GCN5 isoform X1
KO
K06062
histone acetyltransferase [EC:
2.3.1.48
]
Organism
spen
Solanum pennellii
Pathway
spen03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107002772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107002772
03036 Chromosome and associated proteins [BR:
spen03036
]
107002772
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
107002772
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
107002772
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
107002772
HAT complexes
PCAF complex
107002772
STAGA complex
107002772
TFTC complex
107002772
SAGA complex
107002772
SLIK complex
107002772
ADA-HAT complex
107002772
HAT-A2 complex
107002772
ATAC complex
107002772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
107002772
NCBI-ProteinID:
XP_015056421
LinkDB
All DBs
Position
10:complement(38113767..38149884)
Genome browser
AA seq
542 aa
AA seq
DB search
MDASHLTAPGRSRSSQSPSPSHSASASATSSIHKRKMASDDHAPPFPSSFSDTRDGALTS
NDDLESISARGGGADSDSEDDSEEVGDDDEEDYDASSIRNFTASRLETSVAMVPSGRNTK
IKSDNSVKIESSEIPKEVGTGCSGNVAPPTATGSVSGAVVKDEGMKNIFTENLQTSGAYT
AREESLKREEESGRLKFVCVSNDGVDEHMIWLVGLKNIFARQLPNMPKEYIVRLVMDRNH
KSVMVIRRNLVVGGITYRPYTSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGL
THFLTYADNNAVGYFVKQGFTKEIYLEKERWQGYIKDYDGGILMECKIDPKLPYTDLSTM
IRRQRQAIDEKIRELSNCHIVYPGIDFQKKEAGIPKKAIKVEDIPGLREAGWTPDQYGHS
RFKTVNSLSDQKSLTAFMRSLLKIMHDHPDSWPFKEPVDARDVPDYYDIIKDPIDLKTMS
KRVESELYYVTFDMFLADVRRMFANARTYNSPETIYYKCSTRLESHFSNKVQAGLQSSIK
IQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttcgcacttgacggcgccgggccgatcccggagttcacaatcgccgtcaccc
tcacattctgcgtcggcctcagcgacctcgtcgatccacaaacgcaagatggcatctgat
gaccacgcgccgcctttcccgtcctctttctccgacacgcgcgacggcgctcttacctcc
aacgatgacttagagagtatcagcgcccgcggaggcggtgcagattccgactccgaagat
gactccgaagaggtcggcgatgatgacgaagaagattatgatgcttcttccattcgcaat
ttcactgcctcgcgtttggagactagcgtggctatggtaccttcagggaggaacactaag
attaagagtgataattcagtgaaaattgagtcttccgagataccaaaagaagttggtact
ggttgttccggtaatgttgcaccacctactgccactggttctgtttcaggggcggtagtg
aaggatgagggtatgaagaatatttttactgaaaatttacagactagcggtgcttataca
gcaagggaagagagcttaaagagggaggaggaatcaggaagactcaagtttgtatgtgtt
tcaaacgatggagttgatgagcatatgatttggttagtaggattgaagaatatattcgca
aggcaactaccaaacatgcctaaggaatatattgttcgtcttgtgatggacagaaaccat
aagtctgtaatggtcatcagacgcaatctggtggttggtggcataacatatcgtccatat
accagccagaagtttggggagatagctttttgtgcaattacagcagatgaacaagttaag
ggctatggcaccagactgatgaatcacttgaagcagcatgcacgcgatgtggatgggctg
actcattttctaacatatgctgacaacaatgctgttggttactttgtcaaacagggattc
acaaaagagatttatttagagaaagagcgttggcaagggtatattaaagattatgatggt
ggaatccttatggaatgcaaaatagatccaaagcttccgtacacggatttatctacaatg
atacgtcgtcaaaggcaggcaattgatgaaaagataagggagctatcaaattgtcatatt
gtctaccctggaattgattttcaaaagaaggaagctggcattcccaaaaaggccatcaag
gttgaggatatccctggcttgagagaggctggatggactcctgatcaatatggtcattct
cgtttcaaaacagtaaactccttgtcagatcagaagtctttgactgcattcatgcgctca
ctcctgaaaataatgcatgaccatcccgattcctggcctttcaaagaacctgttgatgca
cgggatgttcctgattattatgacatcatcaaagatccaatagatttaaaaacaatgtca
aagcgggttgagtcggagttatattatgtgacatttgatatgtttttggcggatgtgaga
aggatgtttgcgaacgctcgcacctataactctcctgagaccatttactacaaatgttca
accaggcttgaatcacatttctcaaacaaagttcaagctggtctacagtcgagcatcaag
attcagtag
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integrated database retrieval system
