Solanum pennellii: 107002872
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Entry
107002872 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107002872
KO
K16573
gamma-tubulin complex component 6
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107002872
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spen04812
]
107002872
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
107002872
Cytoskeleton proteins [BR:
spen04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
107002872
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
107002872
NCBI-ProteinID:
XP_015056550
LinkDB
All DBs
Position
11:64820784..64837372
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AA seq
1221 aa
AA seq
DB search
MAVDTNLASLFEKLKLEDPYVQPTQWESIPSESGFSSSLDTNRFSHVQYSTSAVSESSLV
RLALDALQGVESALISIQKLSALFCFDSADRSFHHIPNLWTRTSSTLALGNLLKSIGHFG
CLIFLLHKFVNHFTCLSLARNEDEVQKYDAGDGVGCRMSNHTLVNQAFAVSVAKILDGYT
SSLNTLYASVNLRRRLKAKGGGCFTSVGHGEITLLEAYLHSAGLRTQMDVLGNICNMSDL
ALRYSVLSLEEISAKAFLEFNKFPISGALLTFLYTQLKVANPAHCTLLKFLFLRSWEPYS
GFIRSWIFEGSITDPFTEFIVENMKEQPVHEPGNIGISNDFPFASVRVREGVLPLFLEDC
LRPLFRAGQQLQIIMKLLEFCSTSGPFNGIHEEFLPGIHGFSSEFPSFRSSLLFEKGAIE
TMVVSRNSYYQRMLEKIDNVFTKSKFRFREISLQGMQPRYANHARNLNSPVEFSTNDNLE
TCSTDTGEQTLPHNTMEAEVSTDSDFSCTEDLLESSECSWEENSEEQSDFDLSRKAPGND
VELEPDYLSALSFTYDGLLQKQKFPQCETSCSAEYVSYETWKRMEISCFSTDVSNSERAA
CDSSLPCRSEEKNMLQTLDNQFTNSFQNTSWLPDCFPGDLLNNDGRSSKTTWLHAVEIEP
EISSSSIGGQLNLDFGVSVLPQDPSLPEAYEKDQHPNKACNFLSSTNLPSWQLKHHFNFF
SMNPILTKNSLNLKRESEQMCSRDSREPYPFFDFTCIKDPCQVYIEKFSASSRDQLGAGN
SVFTSTAATSAILTSRQHNLKDYSDENLENKAKPCHTCSPVSSKVHYDNVSSLENVAGGS
GWERLLANSSKILSTTARYPKTSLVTVLEMPLDHIIKKCLLEEILLQYKYLSKLTIKLLE
EGFSLQEHLLALRRYHFMELADWAHLFVSSLQHHKWHTIEAEKRISEIQGILELSVQRSS
CEGDPYKDRLYVYVKGSSMTNISVSARGTFYGIYSFDFLGLGYRVDWPLNVILSPGALRI
YSDIFSFLMQVKLAVFSLSDVWRSLKDLSQLNKKNQHSVFDNAEPKQLSILTEMRHQLNH
FVSTLEQYVQSQLSHVSWCRFMHSLKDKVKDMMDLHSAHMAYLNDSLHICFLSEETQHIA
SIIRSILQSAVDFRSCLKGDISQVLNMRKSFSKNIKELYLCYVKSPKHGEFGLSSFWERL
NYNDHYSEVIGKQMGHQVFLV
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggataccaatttggcttcattgtttgagaagttgaagttggaagatccgtat
gtgcaacctacacaatgggaatcaattccttcagaaagtggcttttcttcttctttggat
actaatcggttttcccatgttcaatattcaacttcggctgtttctgagtctagcttggtg
aggctggcattggatgctctgcaaggtgtagaatcagctctgatatctattcaaaagctc
tctgcattgttttgttttgactcagctgatagatccttccatcatatcccaaatttgtgg
acacggacttcaagcacccttgctttgggaaatttacttaaatccattgggcattttggc
tgcctcattttccttcttcacaaatttgtcaatcattttacatgtttaagtctagctaga
aatgaggatgaagttcaaaaatatgatgccggtgatggtgtgggatgccgaatgagcaat
catacacttgttaatcaggcctttgcagtttctgtggcaaaaattttagatgggtatacc
tcctctctcaatacactatatgcttctgtcaacttgaggcgtcgcttgaaggctaagggt
ggaggctgttttactagtgttgggcatggtgaaatcacattgctagaggcttatctgcac
tctgcaggactaagaactcagatggatgtgcttggtaatatctgcaatatgagtgatcta
gctcttagatactctgtattatctcttgaagaaataagtgccaaagcattcttagagttc
aataaattccccataagtggtgctctgctcactttcttgtacacacaactaaaggtggct
aatccggcccattgcactctcctgaagttcttgtttctacgttcatgggaaccctacagt
ggatttattagatcatggatttttgaaggtagcattactgatccttttactgagttcatc
gtggaaaatatgaaagagcaacctgttcatgagccgggtaacattggaatctctaatgac
ttcccatttgcaagtgttagggtgcgagagggagttttgcctttgtttctggaggattgt
ttgcgtccccttttccgagcaggtcaacagcttcaaataataatgaagttacttgagttc
tgtagtacttctggaccatttaacggtattcacgaagagttccttcctggaatccatggg
ttttcaagtgaattcccaagcttcagatcttccttgttatttgagaaaggagctattgag
acgatggtagtttcaagaaacagttattaccaaaggatgctggagaaaattgacaacgtt
tttaccaagtcaaaattcagatttcgggagatatctctgcaaggcatgcaacctagatat
gcaaaccatgccaggaatttaaactctcctgtagagttttcaactaatgacaacttggaa
acatgttcaactgatactggagagcaaactttgcctcacaacaccatggaagctgaagtt
agcacagacagtgatttttcttgtactgaagatctcctggaatcatctgaatgttcatgg
gaagaaaattcagaggagcaaagcgattttgatctgtcgagaaaagcccctggcaatgat
gtggagttggaaccagattatttatctgctttaagttttacttatgatggtcttctacag
aagcagaagtttccgcaatgtgagacttcatgctctgcagaatatgtttcatatgaaaca
tggaaaagaatggaaatatcatgtttttccacggatgttagtaacagtgaaagagctgca
tgtgacagctctctgccctgtagaagtgaggaaaaaaatatgctgcagacacttgataac
cagtttactaacagtttccaaaatacatcctggctgcctgattgctttccaggagatctt
ctgaataatgatgggaggagctctaagactacatggttgcatgcagttgagattgagccg
gaaataagtagtagtagcattggtggccagttgaatttagactttggtgtttcagttcta
cctcaagatccttcacttcctgaggcttatgaaaaggatcaacatccaaataaagcttgt
aactttttaagttcaacaaatttgccatcatggcagctgaagcatcacttcaactttttc
agcatgaacccaattttgactaaaaactctcttaacctaaagagggagtctgaacaaatg
tgctcaagagattctagagaaccttatcctttttttgattttacatgtataaaggatcct
tgccaggtgtatatagaaaagttttctgccagttctagggatcagttaggagctgggaat
tctgttttcactagcacagcagctacttctgccattcttactagtcgtcaacataactta
aaagattactccgatgagaacttggagaacaaggcaaagccgtgtcatacttgttcccct
gtaagttcaaaggtccactatgacaacgtctcatcattggaaaacgttgctggtgggagt
ggttgggagagactgcttgctaattctagcaagattcttagtacaactgccagatatcca
aagactagtttggtgacagttcttgagatgccactggatcatattatcaaaaagtgcctg
ttggaagagattttgcttcaatacaaatatttgagcaaattgactataaaattacttgaa
gaaggttttagtttgcaagaacatttgctagcactaaggaggtaccattttatggaatta
gcagattgggcacatctgtttgtcagctctctccagcatcataaatggcacaccatagag
gctgaaaagagaatatcagaaattcagggcattcttgagttgtcagttcagagatcttct
tgtgaaggagacccttacaaggaccgtttgtatgtctatgtgaaagggagtagtatgaca
aacatctcagtttcggctagaggaacattttatggaatctactcctttgattttttgggt
ttgggttaccgagtagattggccactcaacgtcatattgtctcctggagcattaagaata
tactcggatatctttagttttctgatgcaagtcaagcttgctgttttctctttaagtgat
gtatggcgctcattgaaggatctttctcaattgaacaagaagaatcaacattctgtgttt
gataatgcagaaccaaagcaattgtccatcttaactgaaatgaggcaccagcttaatcat
tttgtgtcaacattggaacaatatgtacaatcacaactatctcatgtgtcctggtgcagg
ttcatgcattctcttaaggataaggtcaaagatatgatggatcttcattctgcacatatg
gcatatctgaacgactccctgcacatatgtttcttgtcagaggaaactcaacatattgcc
agcattatacggagtatcttgcaatctgcggtggattttcgatcttgtctgaaaggagac
atttctcaggtgcttaacatgaggaaatcattttcgaagaacatcaaagagttgtatcta
tgttatgttaagtcacccaaacatggagaattcgggctgtcgagtttctgggagcgtctg
aattataacgaccattattcagaagttattggtaaacaaatgggacaccaggtctttcta
gtctaa
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