Solanum pennellii: 107002892
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Entry
107002892 CDS
T04130
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Pathway
spen04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107002892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107002892
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107002892
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
U-box type E3
107002892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Neurochondrin
zf-RING_UBOX
MLKL_N
KAP
Arm_2
zf-C3HC4_4
zf-Nse
MCAfunc
zf-C3HC4_2
zf-C3HC4
ArnB_C
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
107002892
NCBI-ProteinID:
XP_015056578
LinkDB
All DBs
Position
11:61417913..61426020
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AA seq
663 aa
AA seq
DB search
MGEEDKGEVAKKLIEIVNDISSISDYRISVKKQFCNLARRLKLLTPMFEEIRDSKEKLPI
ESMKSLLSLKKALESAKELLKFGSEGSKIYLVLEMEHIMNKFQELTSKLEQALNGIYYEK
LEISDEVKEQVALVLSQFRRAKGRVETPDAELHEDLLSLYSRSNYAAVDHDVLRRLVDKL
QLTELDDLKQESLALHEMVIATDGDPEERIEKMSMLLKKIKDFVQTENPNIDSYGRDKSS
NFSGQASADGSQKAPVIPDDFRCPISLELMTDPVIVSTGQTYERSCIEKWLEAGHSTCPK
TQQALTSKSLTPNYVLRSLIAQWCEANGIEPPKRPGSAPPKKSASACTPAEHSMIENLLR
KLKSGSPEEARSAAGEIRLLAKRNTDNRVAIAEAGAIPLLVHLLSTPDSRTQEHAVTALL
NLSICENNKGHIVTSGAVPCIVHVLRKGSMEARENAAATLFSLSVIDENKVTIGSSGAIP
PLVALLSEGTQRGKKDAATALFNLCIYQGNKGRAIRAGVVPTLMQLLTKPQGGMVDEALA
ILAILSSHPEGKAAIGAANAVPVLVDVIANGSPRNKENAAAVLVHLCSGDQHHLVEAQRL
GLIGPLMDLVQNGTERGRRKATQLLERMNRLAEQTKQPQAQAESQTQNQVSRSPASSTNA
IES
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaagataaaggagaagtagctaaaaagttgattgaaatagttaatgatata
tcgagcatatcggattatagaatttctgtgaagaaacagttctgtaatttagctcgaagg
ctcaagttgttgactccaatgttcgaagagattcgtgatagcaaagagaaattacccatt
gaatctatgaaatcgttgctttcattaaaaaaagctcttgaatctgctaaggaattgctc
aaatttggtagcgaaggcagtaagatttatctggtgctagaaatggagcatatcatgaat
aaatttcaagagctgacatccaagcttgaacaagctttgaatggaatttattatgaaaag
cttgaaatatccgacgaagttaaggaacaggttgcacttgtcctttctcagttccgaaga
gccaaaggaagggttgaaacacctgatgctgaactgcatgaagatttgctgtctctttat
agcaggagtaattacgccgctgtagatcatgatgtcctaaggaggttagttgataagcta
cagctgaccgagttagatgaccttaaacaagaatcactagctttgcatgaaatggtcatt
gctactgatggggatcccgaggagagaatagagaagatgtcaatgctactgaagaaaatc
aaggactttgtacagactgaaaatccaaacattgattcttatggaagagataagtcttca
aattttagcggacaagcatctgcagacggaagccagaaggccccagttataccggatgat
tttcgttgccctatttcattggagttgatgaccgatcccgtcattgtttcaactggacag
acctatgaacgttcttgtattgagaagtggctggaagctggacatagcacttgtcctaag
actcaacaagccctcacaagcaaatctctgacacccaactatgtattgcgtagccttata
gcacagtggtgtgaagcgaatgggattgaaccacctaaaagaccaggtagtgctccacct
aaaaagtctgcatctgcatgcactcctgctgagcactcaatgatagagaatctcctgaga
aagctcaaatccggcagccccgaagaggcgcgttctgctgcaggtgaaatccgccttctt
gctaagcgtaatactgataatcgtgttgcaatagctgaagctggtgccattcctctgcta
gtccatcttctatccacacctgattctcgaactcaagagcatgctgttacagcacttctc
aacctttccatttgtgagaataataaaggacacatcgtaacttcaggcgcagtaccttgt
attgttcatgtactcaggaaggggagcatggaagcacgtgaaaatgcagcagccaccctt
ttcagcctttcagttatcgatgaaaataaggtcaccattggttcttcaggagcgattcct
ccgcttgtggcgttactaagtgaaggtacacaaaggggaaagaaagacgcagctacagca
cttttcaatctatgcatttatcaagggaacaagggcagggcaataagggctggagttgta
cctacattgatgcagctgctcacaaaacctcaaggtggtatggttgacgaagcacttgct
atattagcaatcttgtcaagtcatccagaagggaaggcagctataggagctgcaaacgcg
gttcctgttttggtagacgtgatcgcaaatggttctcccagaaacaaagaaaatgctgct
gcagttttagtacacctctgctctggggaccaacatcatctggtcgaagcacagcgactt
ggtttgataggtcctttgatggatttagtacaaaatggaaccgaaagaggccgaagaaaa
gctacccaactgcttgaaagaatgaacagacttgctgagcagacaaaacagccccaggcg
caagccgagtctcaaactcaaaaccaggtctcgcggtcaccagcctcatcaactaatgcc
attgagagttga
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