Solanum pennellii: 107002906
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Entry
107002906 CDS
T04130
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
spen
Solanum pennellii
Pathway
spen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107002906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107002906
Enzymes [BR:
spen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107002906
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
107002906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
107002906
NCBI-ProteinID:
XP_015056598
LinkDB
All DBs
Position
11:complement(65804777..65835978)
Genome browser
AA seq
1390 aa
AA seq
DB search
MNRAQESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQN
GLLDPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS
SILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTATCSKCGYMNGMVK
KLQLKITHEQGNRILDEINVAISDKRELRASVSVPPEIDPKVVYSLFKNMSDEDCELLYL
SDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPV
KSLNQWIDLQMEVAQYINSDVRGVPLQMQPPRPLSGFTQRLKGKQGRFRGNLSGKRVEYT
GRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHP
DGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT
LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDF
LTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHVLLRPY
SKMRVYVNLTLTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLL
RDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCI
TQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGS
PINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFF
FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMD
PSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICKIVNERLSYHDMTPEGGCSEA
FRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEKIVLNISGITKKQLQVFLNT
CISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA
KKITTPIITAKLLSAGNLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETI
QVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLP
AVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHI
MEVQHTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKM
KDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQRVEHVEL
NYQPDPMMIK
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagcacaagagtcattgcaagttaccaaacagccttacattgaagatgttggc
cctagaaagataaaaagcattaaattttctctattctcagagtctgagattttgaaatta
gctgaagttgaagtctaccttgggctttactatgaatctactaaaaagcctattcaaaat
ggcttgttagacccccgcatgggacctccaaacaagagtggatgttgtgaaacatgtcat
ggtaactttagagaatgtccaggtcattatgggtacttggttcttgctctaccagtttat
aatgttggatatttaggtactgtggtggacatcttgaagtgcatatgcaagtgctgctcc
tcgatacttctggatgacaaggagcgtcgagacattttgaagaagatgagaaatccaaga
actgagtttttgaagaagagtgaactacataaaagggttgtgaaaaggtgtaatgccatg
gcaggtggccagaagactgccacatgttccaaatgtggatacatgaatggtatggtgaaa
aagcttcagttaaaaatcacacatgaacaaggaaaccgtatcttggatgagatcaatgta
gctatctctgacaagagagaactcagggcatctgttagtgtgcctccagaaattgaccca
aaagtagtttactcccttttcaagaatatgtccgatgaggattgtgagttactctacctt
agtgatagaccagaaaaactccttgttacaagtattccggtgccaccaatagctattcgc
ccttcagtatttgtggatggtggaacacagagcaatgagaatgacatcacggagaggctt
aagcgcattattcaagcaaatgccagtcttcatcaagagatgtctgattccagtcctgtt
aagagtctgaatcaatggattgatctgcaaatggaagttgcacaatatataaacagtgat
gttcgtggagtgcctctacagatgcaacctccgagaccattgagtggtttcactcaacgt
cttaaaggaaagcagggacgattccgtggaaatctctcaggaaagcgtgtggagtatact
ggccgaactgttatatctcccgatccaaatttgaaaattacagaggttgccattccaata
ctgatggctcaaattttaacatatcctgagcgagtttcccagcacaatatagagaagttg
aggcaatgtgttcgtaatggaccaaataagtatcctggtgcgaagtttatcaggcatcct
gatggaaatgagatgtcgttgatgttctcttctagaaagcgttatgctgatgaattgaaa
tttggttatattgttgatcgacacctcgaagatggagatatagtcctgtttaacagacag
ccaagtctgcatagaatgtcaatcatgtctcatcgggcaaggataatgccatggcgcaca
ttgagatttaatgaatctgtatgcaacccttataatgctgattttgatggtgatgagatg
aatatgcatgtgccacaaacagaagaggcgaggacagaggctcttatgttaatgggggtt
caaaacaatttatgcactccgaagagtggagaaattttggttgcttccacccaggatttt
ctgacgtcttcctttctcattacgaggaaggacacattctataaccgtgcttccttttca
cttatttgttcatatatgggcgacgcaatggatcctacagatttaccatctccagcattt
attaagccggttgagctttggactgggaaacaactttttcatgtgctactgcgtccgtat
tcaaagatgagagtctatgtaaatctaacactcacagaaaagagttacagcgggaaaggg
gaaactatgtgcccaagtgatggatttgtttatttccgtaatagcgaactgatcagcggg
cagctcgggaaggctacactagggaatggaaataaggatggtctatactctgttctgttg
agagactatgagtcccatgctgctgcaacatgcatgaatcggcttgcaaagttgagtgct
cggtggattggaaatcatggattttctatagggattgatgatgtcacacctggggaaaac
ttagttaagcaaaaacaaggggaaattcatcgaaattacaagaaatgtgaggattgtatt
acacaatttaatgaaggaaagctagctgtgcaacctggctgtgatgctgcgcaaactctg
gaggctgaagtaactatgtcgttgaataaagttcgtgacgacataggaaaaatttgtatg
aaagcactagactggaggaatagtcctctaatcatgtcacagtgtggttcaaaaggatcc
ccgattaacataagccagatgattgcatgtgttggtcagcagtctgttggtggccgtcgt
gctcctgatggattcatcgatcgaagtcttccgcattttcccttcaaatcaaaatttcca
gctgctaaagggtttgtggctcattccttttttgacggtttgtcagcaactgagttcttt
tttcacacaatgggaggaagagaaggccttgttgatacagcggttaaaactgctgacacc
ggatacatgtctcgtcgacttatgaaagctttagaggaccttgctgtttattatgacagc
actgtaagaaatgctagcgcatgtatagttcaatttatgtatggcgatgatggcatggat
ccttcacggatggaagagaaaaaaggacgtcctttaaactttagcagattatttatgaaa
gttaaggcaacatgtcctcctggaggtgagaagagtttgtcttactcagagatctgcaaa
atagtcaatgaaaggctttcatatcatgatatgactcctgaaggggggtgctcagaggca
ttccgtgcttcgctgtctgattttttgattaaaagtttagctgaaaccttgaaaaattta
cgggaatccctattattgggtgaagagcagtatgaaggggatgaccgtggatatcttgaa
aaaattgtgttaaacatatctggtattactaagaagcaactgcaggtgttcctcaacacg
tgcatctctcggtatcacctgaaaagactagaatctggaactgcgattggtgcaattgga
gctcagagtatcggggaacccgggacacagatgacactgaaaacctttcactttgctgga
gttgcaagcatgaatgttacacttggagttcctcgaataaaagaaatcataaatgcagca
aaaaagatcactactcctattattactgcaaaacttctgtctgctggtaatttaactgca
gcaaggatgattaaagcccgtattgaaaaaactctcttggggcaggtggctaagagtgta
aagattgtgttggcatctcgattagcatcaattgctatttcacttgatatggagacaatt
caggtgtcacaactgtgtattgatgcttatactgtcaagcaatcaattttacagacttca
aaaataaaattgaaagaacatcaaataaaagttctgaatcccaggaagctggaagttttt
cctcaggctaataaagataaactgcattttgaactgcaccggctgaaaaataagctgcct
gccgtggttgtgaagggtattactacagttcaaagggctgtggtgaacaaagaacaacaa
aaagatcgtaaaaatgatgtcaaaggggaaacatatgagttgcttgttgaaggtaccggt
ctccttgctgtaatgggcattgaaggagttgatggacgttatacaaagagcaatcatata
atggaggtgcagcatactctaggcattgaagcagcaagggtttccataattgatgagatt
aattataccatgtcaagtcatggaatgacaatagacttgcggcacatgatgcttcttgca
gatctgatgacatataagggtgaagtcctcggaataactagacatggtgttcagaaaatg
aaagatagcgtactgatgttagcttcatttgagaagacaactgaccacctgtttaatgca
tctgtaaatggaagggatgataagatagaaggagtaaccgaatgtatcatcatgggcata
ccaatgacgataggcaccgggatgtttaaacttcggcaacgtgttgaacatgttgagctg
aattatcaaccagaccctatgatgattaaatga
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integrated database retrieval system
