Solanum pennellii: 107003055
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Entry
107003055 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107003055
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
spen
Solanum pennellii
Pathway
spen00240
Pyrimidine metabolism
spen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
107003055
Enzymes [BR:
spen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
107003055
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
107003055
NCBI-ProteinID:
XP_015056784
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Position
11:complement(29808480..29818331)
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AA seq
343 aa
AA seq
DB search
MADSRLAILSRHFTSAADSASKAGSGSGSCGQNLGWIKISPEVSEALKHGTPIVALESTI
ISHGMPYPQNFETAKELEVIVRDNGAVPATIAILDGVPCIGLTTEELEILARLGSKARKT
ASRDIALVMAGRENGATTVSATMYLASKVGIPVFVTGGIGGVHRHGENTMDVSSDLTELG
NTPVAVISAGIKSILDIPRTLEYLETQRVTVAAYRTDEFPAFFTQTSGCKAPARVESPEH
CARVIDANIRLEQKSGILIAVPIPREHSASGSLIELAIQQALQEAREKKITGNAETPFLL
ARVNELTVGASLASNIALVKNNACIGAKIAVSLAQLQKRSYKR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcaagattagcaatcctcagtcgacacttcacttcagcagcagattctgct
tctaaggctggctctggctctggctcttgtggtcaaaatctggggtggattaagatatct
ccggaggtttcagaagcattaaaacatggaacccccattgttgctttggaatccactatc
atatctcatggaatgccgtatcctcagaatttcgagacagcaaaggagttggaggtcatt
gtgagggataatggtgctgtacctgccactatcgctattctggatggcgtaccatgcata
ggcttgactacagaagaactagagattctagcacgtcttggtagcaaagctcggaaaact
gctagtagagacattgcacttgttatggcaggcagggagaatggggcaactactgtctct
gcaacaatgtatcttgcttcgaaggtgggtattccagtatttgtcactggcggtattgga
ggagtacataggcatggagagaacacaatggatgtttcttctgatcttactgagcttgga
aatactcctgtggctgtgatctctgctggtataaaatcgatactagatattcctcgaaca
cttgaatatttggaaactcaaagagttactgttgcagcttatagaaccgatgagttccct
gctttcttcacacaaaccagtggctgcaaggcgcctgctcgagtagaatcgccggaacat
tgtgctcgagttattgatgcgaacataagacttgagcagaagagtggaatcttgatagca
gtccccattccaagagagcattctgcttctggaagtttgattgagttggcaatacagcaa
gctctccaagaagcacgagagaagaagattactggcaatgctgaaactccgttcttgctt
gcaagagtcaatgaacttactgttggagcatctctggcttcaaacattgctctcgtgaaa
aataatgcctgtatcggtgctaaaattgctgtttcgcttgcccagcttcaaaaacgtagt
tacaaaaggtag
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