KEGG   Solanum pennellii: 107003089
Entry
107003089         CDS       T04130                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH-like
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
spen  Solanum pennellii
Pathway
spen03082  ATP-dependent chromatin remodeling
spen03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107003089
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107003089
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:spen01009]
    107003089
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spen03021]
    107003089
   03036 Chromosome and associated proteins [BR:spen03036]
    107003089
Protein phosphatases and associated proteins [BR:spen01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107003089
Transcription machinery [BR:spen03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     107003089
    SWI/SNF complex
     107003089
Chromosome and associated proteins [BR:spen03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    107003089
   PBAF complex
    107003089
   SWI/SNF complex
    107003089
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 107003089
NCBI-ProteinID: XP_015056826
LinkDB
Position
11:7610201..7622100
AA seq 241 aa
MKPQSASSSLKNPVKFRMPTAENLVPIRLDIEIDGQRFKDAFTWNPNDPDSEVVVFAKRT
VKDLKLPPAFVTQIAQSIQSQLTEFRSYEGQDMHTGEKVVPIKLDLRVNHTVIKDHFFWD
MNNFESDPEEFARTFCEDMKIEDPEVGPAIAIAIREQLYEIAKQSVASARESRANKKGRR
GMEHPSASKVGLPALDLGKLFSIKSSVVRKKRDADAYEPIVDHLSNEEVDALEAKEERFA
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaaaccacaatcggcatcttcttcactgaagaacccagtgaagttcagaatgccaaca
gctgagaatcttgttcctatccgtctcgacatcgaaattgatggccaaagatttaaagat
gcttttacttggaaccccaacgatcctgactcagaggtggtggtgtttgcgaagagaact
gtgaaggatttgaaacttcctcctgcttttgtcactcagattgctcaatccattcagtca
cagttgacagaatttcggtcatatgaaggacaagatatgcacactggcgagaaagttgtt
cccatcaagcttgatctccgagtaaatcacacagttatcaaggaccactttttttgggac
atgaacaattttgagagtgatcctgaagaatttgcacgaacattttgtgaagatatgaaa
attgaagacccagaagttggacctgcaattgccatagcaattagagaacagctttatgag
attgcaaagcaaagtgttgcatccgcgagagaaagcagggctaataagaaaggacgcaga
ggaatggaacatccctcagccagtaaagtaggtttgcctgcactggacctgggcaagcta
tttagcataaaatcaagtgtcgtccggaagaagagggacgctgatgcatatgaaccaatt
gtcgatcacctgtcaaatgaagaggtggatgccctcgaggctaaggaagagaggtttgct
cggtga

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