Solanum pennellii: 107003317
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Entry
107003317 CDS
T04130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107003317
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107003317
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107003317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
107003317
NCBI-ProteinID:
XP_015057111
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All DBs
Position
11:complement(53887547..53894928)
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AA seq
185 aa
AA seq
DB search
MDGPPENDVCSICHGPFNVPCQANCSHWFCASCILQVWDHGSALQACKCPLCRRPITLLV
PSESASRLHRDPEVPGVLRRVEQYNRHFGRHANGLLQRMQDLPFLLRRLLRDMTDPQRSL
PFVIRARVYLAMFLSGIYILSPVDLIPEGFLGIIGLLDDLIIMFICFLHVAALYRSVLLF
RHGGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggatggaccaccggagaatgatgtttgttctatctgccatggccctttcaatgtccct
tgtcaagctaattgttcccattggttttgtgctagctgtattctacaagtttgggatcat
ggatcagcccttcaagcatgtaaatgtccattatgccgtcgtccgattaccttgttggtt
cctagtgagtctgcatcaaggttgcatcgagatcctgaagttcctggggtcttacggaga
gttgagcaatataaccgccattttggtcgacatgccaatggccttctccagagaatgcaa
gatcttccgtttctcctccgaagattactgcgagatatgacagatcctcaaagatctctt
ccgtttgtcatcagggcgcgtgtctatttggcaatgtttttaagtggcatatacatcctt
agccccgtggaccttatccctgaaggttttttgggtataataggtttactagatgatctg
attatcatgttcatctgtttccttcatgttgctgctctgtatagatcagttcttctgttt
cggcatggaggttcttaa
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