Solanum pennellii: 107004022
Help
Entry
107004022 CDS
T04130
Name
(RefSeq) myosin-12 isoform X1
KO
K10357
myosin V
Organism
spen
Solanum pennellii
Pathway
spen04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107004022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107004022
04131 Membrane trafficking [BR:
spen04131
]
107004022
03029 Mitochondrial biogenesis [BR:
spen03029
]
107004022
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spen04812
]
107004022
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107004022
mRNA cycle factors
P-body specific factors
107004022
Membrane trafficking [BR:
spen04131
]
Others
Actin-binding proteins
Myosins
107004022
Mitochondrial biogenesis [BR:
spen03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107004022
Cytoskeleton proteins [BR:
spen04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107004022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
KASH_CCD
TSC22
AAA_22
nSTAND3
AAA_16
AAA_6
DUF1664
Pox_A_type_inc
Asp_aminotransf
DUF3138
Motif
Other DBs
NCBI-GeneID:
107004022
NCBI-ProteinID:
XP_015057731
LinkDB
All DBs
Position
1:complement(90817589..90829861)
Genome browser
AA seq
1568 aa
AA seq
DB search
MGTPVNIIVGSQVWIEDPDDAWIDGEVTEIKGSNATVATTNGKTTVASISSIYPKDTEAP
PSGVDDMTKLAYLHEPGVLNNLACRYSLNEIYTYTGNILIAVNPFRRLPHLYDTHMMQQY
KGAPFGELSPHLFAVADACYRALINEHGNQSILVSGESGAGKTETTKMLMRYLAFMGGRS
GTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKHAKISGAAVRTYLLE
RSRVCQVSDPERNYHCFYMLCAAPPEDVKRFKLGNPKTFHYLNQSNCYEVANVDDAREYL
ETRNAMDVVGIGQEEQDAIFRVVAAILHLGNINFVKGKEADSSKLKDEKSLFHLKTAAEL
FMCDEKALEDSLCKRVIVTPDGNITKLLDPAAATTSRDALAKTVYSRLFDWLVDKINSSI
GQDPEAKSIIGVLDIYGFESFKINSFEQFCINLTNEKLQQHFNQHVFKMEQDDYTTEEIN
WSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKATHETFAQKMYQTYRAHKRFSKPKL
ARTDFTINHYAGDVTYQADHFLDKNKDYVIAEFQALLMDSKCSFVANLFPPLPEESSKQS
KFSSIGTRFKQQLQSLMETLNTTEPHYIRCVKPNTVLKPGIFENMNVLNQLRCGGVLEAI
RISCAGYPTKRTFDEFLDRFGTLAPDVLDGCDEKSACIAICDRMGLKGYQIGKTKVFLRA
GQMAELDARRTEVLAHAAKRIQRQIRTYLTRKEFIALKRATIHFQKLWRAQLARVLYEQM
KREAASIRIQKHARSHSARKSYKELQAAAVVIQTGMRAMAARNEYRQRRRNKAAKIVQTQ
WRGFHAFSTYKQKKKASLSLQCLWRGRLARKVLRKLRMDARDTGALKEAKDKLEKRVEEL
TWRLDFEKHLRTDLEEAKGQEISKLQKALQEMQMQLDEAHDAIIHEKEAAKIAIEQAPPV
IKEVPVIDNTEVEKLTEENNKLEDEIRELKKRVEDFEQSYNEVEKECQATRKEAEESQLR
VSELQESIERLQLNLSNLESENQVLRQQALVASTNEALSEEMDILKNKIKDLESENELLR
TQRVVVEQVVSSDDRAPKGHETVDITHPADNGHQTEEVHEEMKVEQQISKDSSPPISLTK
QRSLTDRQQENHDILIKCLAEDKRFDKGRPVAACTLYKALLQWRSFEAEKTNIFDRIIHT
IRSSIEDQDNTSDLAYWLSTSSTLLFLLQSTIKAGNAPTRSPYRNRSSPTTLFGRMAQQG
FRSTSLSMAISSGYSGIEGSPNVRTRIEAKYPALLFKQHLTACVEKIYGMIRDNLKKEIS
PFLNQCIHAPRSARIKPLKGSSRSIHSNIIAKQQASSVHWQNIVNSLDNTLTILSENNVP
STITRKILSQVFSYINVQLFNSLLLRRECCSFSNGEYLKAGLQELESWCSKATEQYAGSS
WDELQHIRQAVGFLVLHQKSQKALDEITSDLCPMLSIAQIYRIGTMFWDDKYGAHGLSPE
VISKMRALTLEDSASIPNNTFLLDVDSSIPFSIEEISRSFQSINLSDVEPPPLLRQRSDF
QFLLQAAA
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgggaactcctgtaaacatcatagttggatcccaggtgtggattgaggatcctgatgat
gcctggattgatggagaagtcacagaaattaaaggctcaaatgccacagtagccacaact
aatgggaagacgacagttgcttctatttctagcatatacccaaaggataccgaagcacca
ccatctggggttgatgacatgaccaagttagcttatctccatgagcctggcgttctgaat
aaccttgcttgtcggtattctctaaatgagatatatacttacacagggaatatcctgatt
gcggtcaatccatttcggagacttccacatctgtatgatacccatatgatgcagcaatac
aagggagccccatttggagagctaagtccacatctttttgcagtggcagatgcctgttat
agggcattgataaatgagcatggcaaccagtctatcttggtcagtggagagagtggtgct
ggtaaaactgagacaacgaaaatgttaatgagatatctcgcgtttatgggtggaaggtct
ggcactgaaggaagaacagtcgagcaacaagttttggagtccaacccagttttagaagca
tttgggaatgcaaagactgtgaagaacaacaattccagtcgttttggtaaatttgttgaa
attcagtttgataagcacgcgaagatttctggggctgcagttaggacatatcttcttgaa
aggtcacgtgtttgccaagtctcagacccagagagaaactaccattgtttttacatgctt
tgtgctgcaccaccagaggatgtgaaaagattcaaacttgggaatccaaaaacatttcat
tatctaaaccaaagtaactgttacgaagttgcaaatgttgacgatgcaagagagtatctt
gaaaccagaaatgctatggatgttgttggaatcggtcaggaggaacaggatgctatattt
cgtgttgtagctgcaatactccatctcggaaacatcaactttgtgaaaggaaaagaggct
gattcctccaaactaaaagatgagaagtcactttttcatctgaagacagctgcagagcta
ttcatgtgtgatgagaaggcactagaagactcactttgtaagcgtgtcattgtaactcct
gatggaaacatcacaaaactactggatcccgcagctgcaaccacgagcagggatgccctg
gcaaagactgtatactccagattgttcgactggcttgtggacaagataaacagttcaatt
ggacaggatcctgaagcaaaaagcataattggcgtccttgatatatatggctttgagagc
ttcaaaatcaatagttttgagcaattctgcatcaacctaacaaatgagaagttgcagcag
cattttaaccagcacgtattcaagatggaacaagacgactatacgacagaagaaatcaac
tggagttatgtggagtttgtagataaccaagatgttttagatcttattgagaagaaacct
ggaggcattattgctcttcttgatgaagcttgtatgttcccaaaagcaactcatgagaca
tttgcccaaaagatgtaccagacatacagagcccataaacggtttagcaagccaaaactt
gctcgtactgactttacaatcaatcattacgctggtgatgttacttaccaagcagatcac
ttccttgacaaaaataaggactatgtgatagcagaatttcaagctcttctgatggactca
aagtgctctttcgttgcaaacctcttccctccattgccagaagaatcgtccaagcagtcc
aagttctcatccatcggcacacggtttaagcaacaactgcaatctttaatggagaccttg
aacactacagagccacattacatcagatgtgtaaagcccaatacggttctaaagccagga
atatttgagaacatgaatgtattaaaccaattaagatgtgggggtgtcttagaggcgatc
aggataagttgtgcaggatacccaacaaaaagaacattcgacgagttccttgaccgcttt
gggacattagctccagatgttcttgacggatgtgatgagaagtcagcatgcattgcaatt
tgtgatagaatgggcttaaagggttatcagattgggaaaaccaaagtttttctcagagcc
gggcagatggctgaattagatgccagaagaacagaagttctagctcatgctgcaaagcgc
attcagagacaaattcgaacatatcttacacgaaaggagttcatagccctaaagagagct
acaattcatttccagaaactatggagagcacaacttgccagagtgctgtatgaacaaatg
aaaagggaagctgcttcaatacgcatacagaaacatgcgcgttctcattcagcaagaaaa
tcttacaaggaattacaggcagcagctgtagtcattcaaacagggatgagagctatggca
gcacgaaatgaatataggcagaggaggagaaataaagcagctaaaatagttcagactcaa
tggagaggattccatgccttctcaacttataaacagaagaaaaaagcaagtctttcactt
caatgtctctggagaggcaggttagcgaggaaggtgcttcggaaattgaggatggatgca
agagatactggggcacttaaagaagcaaaggacaaactggaaaagcgtgtcgaggagtta
acatggcgattagattttgaaaaacacttgaggactgatctagaagaagcaaaggggcaa
gaaatttcaaaattgcaaaaagccttacaagaaatgcaaatgcaactagatgaagcccat
gatgcaattattcatgagaaagaagcagcaaagatagccattgaacaagctcctccagtt
atcaaggaggtaccagtgattgacaacaccgaagtagagaagctgacagaggaaaacaac
aaactcgaggatgaaatcagagagctcaagaagagagtagaagacttcgaacagagctac
aatgaagttgaaaaagaatgccaggccacacgtaaagaggcagaagaatctcagctgaga
gtttcggagctccaagagtccatagaaagattacaactgaatctatccaaccttgaatct
gagaatcaggttctccgccagcaggctttagtagcatcaacaaatgaggccctttctgag
gaaatggacatactcaagaacaagattaaagacttggagtcagaaaacgagcttctccgc
actcaaagggtagttgtggagcaagtagtaagttctgatgatcgggcacctaaagggcat
gagactgttgatatcacacatccagctgataatggacatcaaacagaggaagtgcatgaa
gaaatgaaagtagaacaacaaatatcaaaggattctagccctcccatctctttaactaag
caaagatccttgacagataggcagcaggaaaaccatgatatactgatcaagtgccttgcg
gaagacaagcgatttgacaagggaagaccagtagctgcatgcaccctatacaaagcactt
ctgcagtggagatcctttgaagcagaaaaaacgaatatatttgataggattattcatacc
atccgatcatctatagaggatcaggataacaccagtgatcttgcctactggctgtcaaca
tcttcaactctgttgttccttttgcaaagcacaattaaagctggtaatgcacctactagg
tccccatatcgtaatcgcagctcacctaccacattgtttggaagaatggcacagcagggt
tttcgctcaacttcattaagcatggcaatttccagtggatacagcggaattgagggaagc
ccaaatgtccggacaagaattgaagctaaatacccagctctattgtttaagcaacaccta
actgcttgcgttgagaaaatatatggaatgatccgcgacaacttaaagaaagaaataagt
ccatttcttaaccaatgcatacatgcaccaagatctgcaaggataaaaccattaaaagga
tcatctagaagtatacattcaaacatcattgcgaaacaacaggcatccagtgtacactgg
caaaacattgtgaatagcttagacaatacattgaccatactctcagaaaataatgtccct
tccaccattacaaggaaaatactcagtcaggtgttctcatacataaatgtccagcttttt
aacagcttgttgcttcgccgtgaatgctgctcatttagcaacggggaatatctgaaggca
ggtctgcaagaactagaaagttggtgttccaaagcaacagaacagtatgctggatcttcg
tgggatgagcttcaacacataaggcaagctgtaggatttctggtgctacatcaaaaatct
caaaaggcattggatgagatcacaagtgacctctgcccgatgttgagcattgcacaaatt
tatcgcattggaactatgttctgggacgacaaatatggagcccatggtttatcaccagag
gtcattagcaagatgagagcactaacattggaagactcagccagcattccaaataataca
ttcttgcttgatgtggattcaagcataccattctctatagaagaaatatcgcgatccttc
cagagtatcaacttgtctgatgtagaaccacctcccctccttcgtcaaagatcagatttt
caattcctgctgcaggcagcagcataa
DBGET
integrated database retrieval system
