Solanum pennellii: 107004122
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Entry
107004122 CDS
T04130
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107004122
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107004122
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
107004122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
FANCL_C
Wzz
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
107004122
NCBI-ProteinID:
XP_015057842
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Position
11:262564..263519
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AA seq
220 aa
AA seq
DB search
MLTRTSTLLIQEFMENFHYSRRLLPESTMAPPPAAGISHYATNHQPFGHKVNTFDANVIM
VLAVLVCALICSFILNFIIKCVCRCTTLILVDSSLNHTNNNPSSTKLVNRGIEKKALKTF
PVITYSTTELKHPGLDSECVICLSEFGIGEKIKVLPKCNHGFHVKCIDKWLNSHSSCPTC
RHCLIETCQKIVPISSALVQEVVIRVEPLQREDVVSNNQH
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgttaactagaacttccactctattaattcaagaattcatggagaacttccactactca
agaagattactcccggagtccaccatggcaccgccaccggcagccggaatcagccactat
gcaactaatcatcaaccatttggtcacaaagtcaacacatttgatgcaaatgttattatg
gtcttggccgtacttgtatgtgccttgatttgttcatttatcttgaatttcatcataaaa
tgtgtatgtaggtgcactaccctaatattggtagactcatccttaaaccatacaaacaac
aacccttcttcaacaaaactagtcaatagagggatcgagaaaaaagccctcaagacattt
ccggttataacatatagtactactgaattgaaacatccagggttggactctgaatgtgtc
atttgcttatctgaatttggaattggagagaaaattaaagttctacctaaatgcaaccat
gggttccacgtcaagtgtatcgataaatggctcaattctcactcttcttgccctacttgt
aggcattgcctaattgagacttgccaaaaaattgttccaatttcatcagctctagtacaa
gaagttgtaataagggttgaacctctccaacgtgaagatgttgtatctaataatcaacat
tag
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integrated database retrieval system
