Solanum pennellii: 107004150
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Entry
107004150 CDS
T04130
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107004150
04121 Ubiquitin system [BR:
spen04121
]
107004150
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107004150
Membrane trafficking [BR:
spen04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107004150
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107004150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-Nse
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
107004150
NCBI-ProteinID:
XP_015057874
LinkDB
All DBs
Position
11:complement(5899195..5900568)
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AA seq
335 aa
AA seq
DB search
MSSTENPNSGNRTFHRYWCYQCHLIVRVSPENPSEIICPRCFGHFLCEMNETNPGQLLDF
TAFDPSPEARILEALTLMLDPNLFNTSQANVVPIFRRSDGTETLVPPPPLPTRGRERIRD
FWLRPRRRYSFLNDTDEFTPESGILARPRSWIVIRPSSSGGPDRGQRRRLGPPDVNNNRD
YFTGPDLENLIEELTQNDRPGPAPAPEPIINSIPTVVIAAAHLKDDSECPVCKEKFKIGG
EARELPCKHIYHSDCIVPWLRLHNSCPVCRNPVPVSSEAQVDSSDDCVEEEERMNRQRRC
FRLRQMAASLWPFRSRYRAMRNHDEPSAQSSCNIL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacggaaaaccctaacagtggtaacagaaccttccatcgttactggtgttat
caatgccatcttatcgtcagagtatcgccggaaaatccctcggagatcatctgtcctcgc
tgtttcggtcacttcctctgcgaaatgaatgaaacaaaccctggacaactcttagacttc
actgcatttgatccttctccagaagctagaattctcgaagctctgactctaatgctcgat
cctaatttattcaacacctctcaagccaatgtggtccctattttccgtcgttcagacgga
actgaaactctcgtaccaccaccaccactacctactcgtggacgagagagaattcgagac
ttctggttaaggcctagaaggagatactcatttctaaacgacacggatgaatttacacca
gagagcggaatcctagcacgtccgcgctcatggattgtcatccgaccatcatcatcgggt
ggacctgaccgcggacaaagacggcggttaggtccacccgatgtaaataacaatagagat
tatttcacaggtcctgatcttgaaaatctaatagaagagttaacacaaaatgatcggccg
ggtcctgcaccagcaccggagccgatcattaattcgattccgacagttgtaattgctgcc
gcacatttaaaagatgattccgaatgtccggtgtgtaaggaaaaatttaaaataggcgga
gaagcaagagagttaccatgtaaacatatatatcattccgattgtattgttccttggtta
aggttacataattcctgcccggtttgtcggaatccggtgccggtttcttcagaagctcag
gtggatagttctgatgattgtgttgaagaagaagaaaggatgaacagacaacggcgttgc
ttcagacttagacaaatggcagcttctctatggccatttaggtcgaggtatcgtgctatg
cgtaatcatgatgaaccatcggcgcagtcgtcatgtaatattctttag
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integrated database retrieval system
