Solanum pennellii: 107004410
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Entry
107004410 CDS
T04130
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spen
Solanum pennellii
Pathway
spen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107004410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107004410
03110 Chaperones and folding catalysts [BR:
spen03110
]
107004410
03029 Mitochondrial biogenesis [BR:
spen03029
]
107004410
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107004410
Enzymes [BR:
spen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
107004410
Messenger RNA biogenesis [BR:
spen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
107004410
Chaperones and folding catalysts [BR:
spen03110
]
Heat shock proteins
HSP60 / Chaperonin
107004410
Mitochondrial biogenesis [BR:
spen03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
107004410
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107004410
Exosomal proteins of other body fluids (saliva and urine)
107004410
Exosomal proteins of breast cancer cells
107004410
Exosomal proteins of colorectal cancer cells
107004410
Exosomal proteins of bladder cancer cells
107004410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Nuc_N
Motif
Other DBs
NCBI-GeneID:
107004410
NCBI-ProteinID:
XP_015058097
UniProt:
A0ABM1FK69
LinkDB
All DBs
Position
11:64223800..64229101
Genome browser
AA seq
588 aa
AA seq
DB search
MASANAISTASIIPSPSKQGGLKNRKVSQLQGQRFGNKGAKNRFVVKACAKEIAFDQKSR
SALQAGIDKLADAVGLTLGPRGRNVVLDEYGTPKVVNDGVTIARAIELPDAMENAGAALI
REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVLGLIEELEKK
ARPVKGRDDIKAIASISAGNDESIGTMIADAIDKVGPDGVLSIESSSSLETTVHVEEGME
IDRGYISPQFVTNPEKLISEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDI
TGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEYQATDLGLLVENTPV
EALGIARKVTITKDSTTIIADAASKDEIQSRIAQLKKELSETDSVYDSEKLAERIAKLSG
GVAVIKVGAATEAELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKEKIE
DADERLGADIIQKALVAPASLIAQNAGVEGEVVVEKVKEAEWEMGYNAMTDQYENLVEAG
VIDPAKVTRCALQNSASVSGMVLTTQAIVVEKPKPKVAAPAAPQGLQV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgctaatgctatttccactgcttctattatcccttctccttctaaacagggg
ggtttgaagaataggaaggtcagccaattgcagggacagagatttggcaacaagggtgca
aagaaccgatttgtagtcaaggcctgtgctaaagaaattgcctttgaccagaaatctagg
agtgccctgcaggctggaatcgacaagcttgctgatgctgtcggcctgactcttggtcca
aggggaaggaatgtagtgttggatgaatatggcacccctaaggtggttaacgatggagtt
acaattgctcgtgccattgagctacctgatgctatggagaatgctggggctgcccttatc
agggaggttgcaagcaaaaccaatgattcagctggtgatggaacaacaactgcatctgtt
cttgctcgggaaatcattaaactcggtctgttgagtgttacatctggtgcaaatccagtg
tctttaaagaggggcattgacaaaactgtactgggtttgattgaagagctagaaaagaag
gctagacctgttaaaggccgtgacgacatcaaagctattgcttcaatctctgctggaaat
gatgaaagcatcggtaccatgattgcggatgcaattgacaaagttggtccagatggtgtg
ttgtccattgagtcatcctcctccttagagacaactgttcatgttgaagaaggaatggag
atcgatagaggatatatttccccacaatttgtcacaaaccctgagaaattaatttctgaa
tttgagaatgctagagtcttggttactgatcagaagatttcagctatcaaggacattatc
cctctattagaaaagacaactcaattacgcgcccctctcctcattattgccgaggatatc
accggggaagctctggccactcttgttgtgaacaagttgcgaggtatactgaatgttgct
gccatcaaagctcctggatttggtgaaaggagaaaggctcttctgcaagatattgccatt
gtgacaggagctgagtaccaggcaactgatttgggcctgctcgttgagaataccccagtt
gaagcacttggaattgccagaaaggtgacaattaccaaggactcaacaaccatcatcgct
gatgcagcatcaaaggacgagatacaatctaggattgctcagcttaaaaaggaactgtct
gagacagactcagtgtatgactccgagaaacttgctgagagaattgccaagctttctggg
ggtgttgccgtcattaaggttggagctgcaacagaggccgagcttgaagaccgcaagctt
cgtattgaagatgcaaagaatgcaacttttgctgcaattgaagagggaatagtacctggt
ggtggtgctgcttttgttcatttatcaacttatgtccctgccattaaggagaagattgaa
gatgctgatgaaagattgggcgctgacatcattcaaaaggcattggtagccccagcatct
ttgatagcccaaaatgctggagttgaaggagaagtagtcgtggagaaggtgaaggaagcc
gaatgggagatgggttataacgcgatgacagaccagtatgagaatctcgtggaagctgga
gtcatcgatccagccaaggtgacaagatgtgccttgcagaattcagcatcagtttcagga
atggtgctgaccacacaagccatagtggttgagaagccaaagcctaaggttgctgcacct
gctgctcctcaaggacttcaagtgtga
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