Solanum pennellii: 107004434
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Entry
107004434 CDS
T04130
Name
(RefSeq) nuclear transcription factor Y subunit B-6 isoform X1
KO
K08065
nuclear transcription Y subunit beta
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107004434
Transcription factors [BR:
spen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
107004434
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GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
TFIID-18kDa
CENP-T_C
DUF3050
Motif
Other DBs
NCBI-GeneID:
107004434
NCBI-ProteinID:
XP_015058120
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All DBs
Position
11:5591953..5593522
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AA seq
194 aa
AA seq
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MDNNVGGLGNGGFHGYHTFPSTPATEMRMGVPVPVHLNQDSECTIREQDRFMPIANVMRI
MRRILPPHAKISDDSKQTIQECVSEFISFVTGEANERCQCEQRKTITAEDLLWAMSKLGF
DDYIEPLTFYLHRYREIDGGEHGALTEESAMLKLDPQYAGYFVYPLPMANTTCMQGDGIT
SQCAVESDDSLFLC
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggataataatgttggtggtttaggaaatggaggatttcatggttatcacacattccct
tctacacctgctacagagatgaggatgggagtgcctgtgcctgttcatcttaaccaagat
tctgaatgcactattcgtgagcaagaccgattcatgccaatagcaaatgtgatgagaatc
atgcgtcggatccttcctccccatgctaagatatctgatgactctaaacagaccatccaa
gaatgtgtatctgagttcataagctttgtaactggtgaagccaatgagcgttgccaatgt
gagcagcgtaagaccatcactgctgaagatttgctttgggcaatgagcaagcttggtttt
gatgattacattgaacccttgactttctacttgcatcgctatcgtgagattgatggtggt
gagcatggagccttgacagaggagtctgcaatgttgaagcttgatccacagtatgcaggt
tactttgtgtatccactgccaatggccaacactacttgtatgcaaggggatgggatcact
tctcagtgtgctgtggaaagtgatgactctctgtttctctgctga
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