Solanum pennellii: 107004501
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Entry
107004501 CDS
T04130
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107004501
Spliceosome [BR:
spen03041
]
Common components
Common spliceosomal components
General mRNP proteins
107004501
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
107004501
NCBI-ProteinID:
XP_015058192
UniProt:
A0ABM1FKE6
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Position
11:162481..172194
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AA seq
578 aa
AA seq
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MDFDEYDYLEKTVEETNGTSTKSKDKDNNSSAEKEKSEKGYRRRERDGSEEYADDDNRER
RSSKKSRGDGESIREKDKERDRERSSRHRSRERESERDKERSSKDRDRDREKREKEKEKE
RDRDREKEKERDRDRKSRDRDRDRDKERDKEKDRERERSRRSRSRSRIEREREKEMLRDS
ERDFESRDSRRFKEKKEKIEPEADPERDQRTVFAYQMPLKATERDVYEFFSQAGKVRDVR
LIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGRLLFGQPVMVKPSEAEKNLVQSTASGGG
SGLAGPNAASERKLYVGNLHFNMTELQLRQIFEAFGPVELVQLPTDPETGHCKGFGFVQF
AQLEHAKAAQSLNGKLEIAGRTIKVSSVTEHVGVQDAGAKTADFDDDEGGGLALNAQSRA
MLMAKLDRSGVASGVAGTLGVPALNGAAQPAMSMPMGGATAFQNMLPTQLIASMAPEPIG
IPSECLLLKNMFDPATETDPEFDLDIKDDVKEECSKYGRVKHIHVDKNTSGYVYLRFDSV
EAASRAQQAMHKRWFAGRSISAIYLQPYEYDAKFKGTG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgactatctggagaagactgtggaagagaccaacggtacttct
acgaagagcaaagacaaagacaataacagcagcgccgagaaggagaagagcgagaaaggc
tatcgtcgaagggagagagatggaagtgaggaatacgccgacgacgacaatagagagcgc
cggagcagcaaaaagtctcgcggggacggcgaaagcatcagagagaaggataaggagaga
gatagggaaaggtcatcgaggcatcggagtagggaacgggaatctgagagggacaaagaa
agaagctcaaaagaccgtgaccgtgacagagagaaaagggaaaaggagaaagagaaagag
agggatagagacagggagaaggagaaggaacgtgatagagataggaagagtagagatcgg
gatagagatagagataaggagcgagataaggagaaagatagggagagggagaggtcaagg
aggagccgtagtcgctcgagaatcgagcgagagcgagagaaagagatgttgagagacagc
gagcgtgactttgaatcacgggacagcaggagattcaaggagaagaaagaaaaaatagaa
ccagaagctgatccagaaagggaccagagaactgtttttgcttaccagatgcccttgaag
gcgactgaaagggatgtgtatgagttcttctcacaagcaggaaaggtgagggatgtgcgg
ttaatcatggaccgtaattcaaggcgatctaaaggagttgggtacattgagttttatgat
gctatgtccgtgccaatggctattgctttatctggtcgcttgctctttggccaaccagta
atggtaaaaccttctgaagctgaaaagaaccttgttcagtcaactgcgtctggtggtgga
tcagggttggcggggccaaatgctgcctcagaaagaaaactttatgttggaaatcttcac
tttaacatgacagaattgcagcttagacagatttttgaagcttttgggccagtggagctt
gttcaattacctacagatcctgaaacaggacattgcaaaggatttgggtttgtccaattt
gctcaacttgaacatgctaaggcggctcaaagtttgaatggcaagcttgagattgcgggt
cggaccatcaaggtttcatctgttactgaacatgttggagtacaagatgctggagctaaa
actgcagactttgatgatgatgaagggggtggcctggcattgaatgctcagtcaagggcc
atgcttatggcaaaattggaccgcagtggtgttgcttcaggtgttgcgggtacactagga
gttcctgcacttaatggagcagctcagccagcaatgagcatgccaatgggtggggcaaca
gcttttcagaatatgctcccaacacaactcattgcttccatggctcccgaacccattggg
attcccagcgagtgtttgttattaaaaaacatgtttgatcctgcaactgagacggatcca
gaatttgatttggatattaaagatgatgtaaaggaggaatgttccaagtatggcagggtc
aagcatatccacgtggacaagaatacctctggttacgtgtacttgcggtttgatagtgtt
gaagctgcatctcgtgctcaacaagccatgcacaagagatggtttgctggcagatcaatt
tcagccatctacctgcaaccatatgaatatgatgccaagttcaaaggtacaggctag
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