Solanum pennellii: 107004520
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Entry
107004520 CDS
T04130
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107004520
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107004520
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
107004520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
FANCL_C
PHF5
zf_RING_Vps8_fungal
Prok-RING_1
Cytochrom_C_asm
Motif
Other DBs
NCBI-GeneID:
107004520
NCBI-ProteinID:
XP_015058216
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All DBs
Position
11:275524..276395
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AA seq
219 aa
AA seq
DB search
MATITSTSLIQDFMKNFQYPRRLLLPATPQQTDLSQGDTTNTFDAHVVMVLSVLLCALVC
SLALNSIIRCALRCTSLVSESDSSSSISTNISATTKLTNNGIKKKALKTFPIITYTTELK
HPGLDSECVICLSEFVAGEKVRVLPKCNHGFHVRCIDKWLNSHSSCPTCRHCLIETCQKI
VNGGSSNSTTISNPQVVAQEIIIRIEPLQREGVVSNHQH
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcaactataacttccacttcattaattcaagatttcatgaaaaatttccaatatcca
agaagactacttctaccagccaccccacaacaaacagatctatcacaaggggacaccacc
aatacatttgatgcacatgttgtgatggtactatcagtactattatgtgctttagtttgc
tcacttgccttgaattcaatcataagatgtgcactaagatgcactagtttggtatcagag
tcagactcatcatcatcgatctctacaaacatttcagcaacgacgaagcttacaaataac
gggatcaagaagaaagccctcaagacttttccaatcataacatacactactgagttgaaa
catccaggtctcgactctgaatgtgtcatttgcttatcagaattcgttgcgggagagaaa
gttagggttttgccaaagtgcaaccatgggttccacgtccgatgtatcgataaatggctc
aattcacactcttcttgccctacttgtagacattgtctcattgaaacttgtcaaaaaatt
gtcaatggtggtagctctaattcaactacaatttcaaaccctcaagtagtagcacaagaa
attattataaggattgaacctctacaacgtgaaggtgtggtatctaaccatcaacattag
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