Solanum pennellii: 107004592
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Entry
107004592 CDS
T04130
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107004592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107004592
Spliceosome [BR:
spen03041
]
Common components
Common spliceosomal components
SR proteins
107004592
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
107004592
NCBI-ProteinID:
XP_015058337
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All DBs
Position
11:65399603..65404955
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AA seq
354 aa
AA seq
DB search
MRPIFCGNVEYNARQSELERLFRRYGRVDRVDMKSGFAFVYMDDERDAEDAIRGLDRIEF
GRKGRRLRIEWSKEERNGRRPETSRKSSSSVKPSKTLFVINFDPYSTRSRDIERHFDPYG
KILNIRIRRNFAFVQYETQEDATRALDATNMSKLMDQVITVEYANKDDDDRRNGFSPDRN
RDRGLKRGYDRGRSRSPYGRERGSPDYGRGRARSPSPIRQGRSSPDYGRRPSPNPNHRER
DSEYGSGRSPNMRKERNPDHGNGHSPNPRRLRAGSENGEVHSPPEEGLLESGPSPPRAGR
RGKYSPDDYRGRSRSRSPRSKPEEIGSPRYAAAESPLPERHRSLSPPTRERSRS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaattttctgtgggaatgttgagtataatgccagacagtcagagttggagagg
cttttcagaagatatgggagagtggatagagtggatatgaaatctggttttgcttttgtg
tacatggatgatgaaagagatgcagaggatgctattcgtggacttgaccgtatagaattt
ggcagaaagggacgcagacttcgcattgaatggtcaaaggaagagcgtaatggtaggagg
ccagagacttcaaggaaatcttcatctagtgtcaaaccttcaaagactttgtttgtcata
aattttgatccatatagtactaggagcagggatatagagaggcactttgatccatatgga
aaaatactcaatataaggataagaagaaattttgcatttgttcaatatgaaactcaggag
gatgctactagagccttggatgctacaaacatgagtaaactgatggatcaagtcattaca
gttgaatatgcaaataaagatgatgatgacaggagaaatgggtttagccctgatagaaac
cgagataggggtcttaagagaggttatgaccgaggccgatctcggagtccttatggaaga
gagagggggagtcctgattatggtcgtgggcgggcccgtagcccaagtccgatccgtcaa
ggtaggtcaagccctgattatggtcgtcgacctagtcctaatcccaatcatagggaaagg
gattctgagtatggcagtggccgtagtccaaacatgagaaaggagaggaaccctgatcat
ggaaatggccatagtccaaaccctcgtaggctgagagccggttctgaaaatggtgaggtg
cacagtccaccagaggaaggacttctggaatctggtcctagtccccctagggcggggagg
agagggaaatatagcccagatgattatcgtggccgtagccgtagccgtagcccaaggtct
aaacctgaagaaataggtagtcctagatatgctgcagcagaaagtcctcttccagaacga
cacaggagcctttcacctccaactcgagaaagatcccgctcctaa
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