Solanum pennellii: 107004729
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Entry
107004729 CDS
T04130
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spen
Solanum pennellii
Pathway
spen00061
Fatty acid biosynthesis
spen00071
Fatty acid degradation
spen01100
Metabolic pathways
spen01212
Fatty acid metabolism
spen04146
Peroxisome
Module
spen_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
107004729
00071 Fatty acid degradation
107004729
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107004729
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spen01004
]
107004729
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107004729
Enzymes [BR:
spen01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
107004729
Lipid biosynthesis proteins [BR:
spen01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107004729
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of breast milk
107004729
Exosomal proteins of breast cancer cells
107004729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
107004729
NCBI-ProteinID:
XP_015058537
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All DBs
Position
11:9544545..9553098
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AA seq
696 aa
AA seq
DB search
MGPYVAGVLVPLVVTILLQNRRSRKKRGLPADVGGEPGYAIRNRRFNAPVETAWDGITTL
AELFEYSCKKYHHKKLLGTRKLLSREMEVSADGRSFEKLHLGDYEWLSYGQAFEIVCNFS
SGLALLGHQRDERVAIFADTCEEWLMALQSCFRRNVTVVTIYASLGEEALCYSLNQTEVT
TVICGQKELKKLADISGQLDTVKRVICIENEIPSSAIVAAGSNWVLKTFSEVETLGRGNP
VDPDLPLAADTAVIMYTSGSTGLPKGVMMTHRNVLATASAVLTIVPGLGSKDVYLAYLPL
AHILELAAETIVPGIGGSIGYGSPLTLTDTSNKIKKGTKGDASALSPTVMAAVPAILDRV
RDGVRKKVDAAGGLSKKLFDLAYSRRLSAINGNWFGAWGLERHFWNLLVFKKVQAILGGR
IRFILSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSDYDDTSVGRVGPPLPCS
YIKLIDWAEGGYQTSDSPMPRGEIIIGGPNVTLGYFKNEEKTKEVYKVDERGMSWFYTGD
IGQFHADGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSSYVDNIMLHADPFHSYCVAI
VVAAQAAVEDWARKHGINFGDFHELCQKEETIKEVYASLVKAAKAARLEKFEIPAKIKLL
SEAWTPESGLVTAALKLKRDVIKKAFSQELAQLYSS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggggccttatgttgctggtgttcttgttcctctggtagtaactattctccttcagaat
agaagaagtcgaaaaaagcgaggcttgcctgctgatgttggtggtgaacctggctatgct
atcagaaaccgtcggttcaatgcaccggtagaaacagcatgggatggaatcacaaccttg
gcagagctttttgagtattcatgcaaaaagtatcatcacaagaagttactaggaactcgg
aaactgctttccagagagatggaagtatctgcagatggaaggtcattcgagaaactacac
ttgggtgactatgagtggttgagttatggtcaggcatttgagattgtgtgcaatttttcc
tctggtttggcactacttgggcaccaaagagatgaacgtgtggccatttttgctgataca
tgtgaagaatggttaatggcattacagagttgcttcagacgcaatgtgacagtggttact
atttatgcatcacttggtgaagaggccttgtgttactcacttaatcagacagaggttact
actgtcatttgtgggcaaaaggaactaaagaaacttgcagacattagtggacaacttgat
accgtcaaacgtgtgatatgcatagagaatgagattccatcaagtgccatcgttgctgca
gggagcaactgggtattgaagaccttttccgaggtggaaactcttggccgaggaaaccct
gttgacccagatttacctcttgcagccgatactgcagtgatcatgtataccagcggaagt
actggattgcccaagggtgtgatgatgacacacaggaatgttctagctacagcttctgct
gttctgacaattgtacccggtcttggaagcaaggatgtttacttagcatacctgccgctt
gctcatattctcgagcttgcagcagagaccatagtacctgggattggtggttctatagga
tatggttctcctctgacccttactgatacttcaaataagataaagaaaggaacaaaagga
gatgcctctgctttaagcccaactgtgatggcagctgtccctgccattcttgatcgggtt
cgagatggcgtgcgtaaaaaggtagatgctgcaggtggattatccaaaaaactgtttgat
ttggcatattctcgtcgactgtctgcaattaatggtaattggtttggagcttggggctta
gaaagacatttctggaaccttttagtgtttaagaaggttcaagcaattcttggcggccgt
atccgttttatcctgtctggaggagctcctctctctggggatactcagagatttatcaac
atatgccttggtgctccaataggccaaggttatggtcttaccgagacctgtgctggtgga
acatttagtgattatgatgatacttctgttggacgtgttggtcctccacttccttgctcg
tacatcaagttgatagattgggctgagggtggatatcaaacaagtgactccccaatgcct
cgaggtgaaattattattggtggtccaaatgttacccttggatatttcaaaaatgaggag
aagacgaaagaagtgtacaaggttgacgagagaggaatgagctggttctatacaggtgac
atagggcaatttcatgcagatggttgccttgagataattgaccgtaaaaaggacattgtt
aaacttcaacacggggaatatgtttccttgggaaaggttgaggctgctcttattgttagt
tcctatgttgataatataatgttgcatgccgatccgttccacagttattgtgtagctata
gtggtggctgctcaagctgctgtggaagactgggctaggaagcatggaattaactttggc
gattttcatgagttatgtcagaaggaagaaactatcaaggaggtctatgcttccttagtg
aaggcagcgaaggctgctcgtttggagaagtttgagatcccagcaaagatcaagttgcta
tcggaagcatggacaccagaatctgggcttgtgactgcagcgttgaagctgaagagggat
gttattaagaaggctttctcacaggaactagctcagttatattcatcatga
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