Solanum pennellii: 107004751
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Entry
107004751 CDS
T04130
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
spen
Solanum pennellii
Pathway
spen03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107004751
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spen01002
]
107004751
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107004751
Enzymes [BR:
spen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107004751
Peptidases and inhibitors [BR:
spen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107004751
Ubiquitin system [BR:
spen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107004751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
107004751
NCBI-ProteinID:
XP_015058574
UniProt:
A0ABM1FLD4
LinkDB
All DBs
Position
11:complement(1080497..1101929)
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AA seq
1118 aa
AA seq
DB search
MTLMTPPPVEQPEDEEMLVPNSDFPVEGPQPMEVATADTASTVEGPQVDDPPSGRFAWTI
EKFSRLNVKKLYSEVFNVGGYKWRILIFPKGNNADQLSLYLDVADSPSLPYGWSRYAHFS
LGVLNQAHTKFTVRKDTQHQFNARESDWGFTSFMPLSELYDPSRGFIMDDTVIVEADVSV
RKVADYWSHDSKKETGCVGLKNQGATCYMNSLLQTLYHISYFRKAVYHMPTTENDNPSGS
IPLALQSLFYKLQYSDTSVATKELTKSFGWDSNDSFTQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECINVDYRSTRKESFYDLQLDVKGCRDIYASFDKYVEVERLEG
DNKYHAEKYGLQDARKGVLFVDFPPVLQLQLKRFEYDFARDTMVKINDRYEFPLQLDLDR
ENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDP
KRALEEQYGGEEELPHTNPAFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEH
LRVRLKKEQDEKEQKRKEKAEAHLYTIIKVARDEDLGEQIGKEIYFDLLDHDKVRSFRIQ
KQMVFTQFKEEVAKVLGIPVQFQRYWLWAKRQNHTYRPNRPLTPQEEVQSVGQLREVSNK
TSNAELKLYLEVEVGLDLQPCPPPEKTKEDILLFFKLYDPLKEEIRYVGRLFVKGSGKPL
DILSKLNELAGFSPDEEIELFEEIKFEPNVMCEPIDCNLTFCSSQLEDGDIICFQKPVRS
QTSEQYRFSDVPSFLEYVHNRQVVHFRSLEKPKEEDFSLELSKLNTYDEVVESLARHLRL
DDPSKIRLTSHNCYSQQPKPQPIKYRGVDRLTEMLVHYNQTSDILYYEVLDIPLPELQCL
KTLKVAFYNAAKYEVTIHTIRLPKQSTVDDVLNHLKTKVELSHPDAELRLLEVFYHKIYK
IFPPTERIENINDQYWTLRAEEIPEEEKNLGPLDRLIHVYHFTKDTTQNQAQHVQNFGEP
FFLVIHEGETLAEVKVRIQRKLQVPDEEFSKWAFAFVSMGRPDYLRDSDIVSIRFQRRDV
YGAWEQYLGLEHADNGPKRSYASNQNRPTFDKPVRIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatgactcctcctccagttgaacagcctgaagacgaggagatgcttgttcct
aattcagattttcctgtagaaggtccgcagcctatggaagttgcgactgcggatacggct
agtacggtggagggtccacaagtggatgatccgccatctggtaggtttgcgtggacgata
gagaaattttcgaggttgaatgtaaagaagctatactcggaagttttcaatgtgggagga
tataaatggaggatcttgatattccctaaaggtaacaatgcggaccaattgtcattgtat
ttggatgttgccgattcaccgtcattgccttatggatggagtagatatgctcattttagc
ttaggtgtgctcaaccaagctcataccaagtttacagtgaggaaagacactcagcaccag
tttaatgcaagggagagtgactggggtttcacatctttcatgcctttaagtgaattatat
gatcccagcagaggttttattatggatgatactgttatagttgaagctgatgtttctgtt
cgtaaggttgctgattactggtcccatgactctaagaaggagactggttgtgttggcctt
aagaatcagggagccacttgttatatgaactctctcctccaaacattgtatcatatttct
tactttagaaaggctgtgtatcatatgccaacaactgagaatgacaatccatctgggagc
atccctttggctttgcagagtctgttctataagctacagtacagtgacactagtgtagca
acaaaagagttgacgaagtcctttggatgggactcaaatgattctttcacgcagcatgat
gtacaagaacttaacagggttctttgtgaaaaacttgaagataaaatgaagggaaccgtt
gtagagggaacaatacaacaactgttcgaggggcatcatatgaattatattgaatgtatc
aatgtggattacagatcaacaagaaaagaatctttttatgacttgcagcttgacgtcaaa
gggtgtcgtgatatctacgcttcttttgacaagtatgttgaagtagaacgccttgagggt
gacaataaataccatgcagaaaaatatggtttacaggatgctcggaaaggtgtccttttt
gttgacttcccccctgttcttcagcttcagttaaaacgttttgaatatgattttgcacgg
gatactatggtcaagataaatgacagatatgagtttcctttacaactcgaccttgataga
gagaatggaaaatatttatctccagatgctgatcgaagcgttcggaatctctatactctt
catagtgttttggttcacagtggtggggtccatgggggacactattatgcttatatcaga
ccaacactctctgatcaatggtttaaatttgatgatgagcgtgtgacaaaagaagatcca
aagagggctctggaagagcagtatggtggtgaggaggagttgcctcatacaaaccctgcg
ttcaacaattcaccattcaaattcacaaaatattcaaatgcatatatgcttgtttatatt
cgtgaaagtgacaaagaaaagattatctgcaatgtggatgaaaaggacattgcggagcat
ctcagggtaaggctaaagaaagagcaagatgaaaaggagcaaaagagaaaggaaaaagca
gaggctcacctttatactatcatcaaggttgctcgtgatgaagaccttggtgaacaaatt
gggaaggagatttattttgatcttttggatcatgacaaagtccgtagtttccgtatccag
aaacagatggtatttacgcaattcaaggaggaggttgctaaggtattgggtatacccgtg
caattccagcggtattggctatgggcaaaacgacaaaatcacacatatcggcctaatcgg
ccattgacacctcaagaggaagttcagtcggttggacaattgagagaggtctctaataaa
acaagtaacgcggagctaaagctttatttggaagttgaagttggcctggatttgcaacct
tgtcctccgcctgagaagaccaaagaagatattcttctatttttcaaactgtatgaccct
ctaaaagaggagattaggtatgttgggcggctctttgtaaaaggaagtggcaagccattg
gacatattgtccaagctaaatgagttggctggattttcacctgatgaagagattgaactc
tttgaggaaataaaatttgaacccaatgtgatgtgtgaacctattgattgcaatctaaca
ttttgtagcagtcagcttgaagatggggacattatttgcttccagaaacccgttcggagt
caaactagtgaacaatatcgattttctgatgttccttcatttttagagtatgtgcacaat
cgccaggttgttcacttccgctcattggaaaaacccaaggaggaggattttagtctcgag
ttgtcaaagctgaacacctatgatgaagtagtagagagtttggctcgccatctccgcttg
gatgacccatctaaaataaggcttacatcacataactgctactcacagcagccaaaacct
cagccaataaagtatcgaggagtggaccgtcttacagaaatgctggttcactataatcag
acttcagacattttgtattatgaagtccttgatattccattaccagagctacagtgctta
aaaactctcaaagtcgccttttataatgctgcaaaatatgaagtgacaatccatactatt
agattgccaaaacaaagtactgtggatgatgtccttaatcatcttaagacaaaggttgag
ttgtcacatccagatgctgaactaaggttgctggaagttttctatcacaagatatataag
atttttccacctactgaaaggattgagaacataaatgatcagtactggaccttgcgtgca
gaagagatccctgaagaggagaaaaacctgggtcctcttgatcgtttgattcatgtttac
cattttacgaaggacacaactcaaaaccaagcacagcatgtacaaaactttggcgaacca
ttttttttggttattcatgagggtgagacactggctgaagttaaagtgcgcattcagaga
aaattgcaggttccagatgaggagttttcaaagtgggcgtttgcgtttgtgtccatgggc
cgtcctgactacctccgggattcagatattgtatctattcgttttcagaggagagatgtt
tatggtgcttgggagcagtatctgggattagagcatgctgacaatggtcctaaaaggtca
tatgcttccaaccagaatcgacccacttttgacaagcctgttcggatctacaactag
DBGET
integrated database retrieval system
