Solanum pennellii: 107004793
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Entry
107004793 CDS
T04130
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107004793
Membrane trafficking [BR:
spen04131
]
Protein recycling
Others
EARP complex
107004793
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Ortholog
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Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
107004793
NCBI-ProteinID:
XP_015058630
UniProt:
A0ABM1FLI3
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Position
11:complement(62021075..62047248)
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AA seq
1098 aa
AA seq
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MQSNSSPPFPLIPLVLFNGGQLSEGGFELSRFLFLGSLLFSQGGDDGMDLSKVGEKILSS
VRSARSLGLLPSSSDRPEMKVFLQVPERAAAAAALARVLAGLPPHQRYTLSSSSEELSSI
YGSKPPGQVVEELEEEFYEEEFDPVGHILEHMPSEESELAYLEDQATLRLSQLDRISERL
SRHVMEHHEVMVKGMDLVRQLERDLKIANVICMNGRRYLTSSRNEVSRDLIVSNNSKRKQ
ALLDVLPVLTELRHALDMQSTLETLVEEGRFSKAFQVLSEYLQLLDTLSELSAAQEMSRG
VEVWLGKTLQKLDSLLLGVCQDFKEENYVTVVDAYALIGDVAGLAEKIQSFFMQEVLSET
HSALKTTVQEDLDNNNVNSSRLTYSDLCTQIPESKFRQCLLATLAVLFRLMCSYHAIQSF
QPEDKEDISSPSTERAPTLASVEDPPTTSVASSDTAMHGSSNINYRVEEARDDGSTASSS
GSPWFQLRKDATTFVSHTLLRGRKNLWQLTTSRAAVLLSSPAIHSASIHQFLITYEDLNI
FVLAGEAFCGSEAVEFRQKVKSVCESYLAAFHRQNIYALKMVLEREHWLILPPETIEVVS
FAGLVGDGAALIVSSETSPNTRLLQEREPVHPIQTKSSKRNGFSSWFKGGNPFLPKLNGS
SRENLESCLPNGSAMQESGNSNEDSLDKSSLRNSDVNHVNGNTTLSEDENEDLHADFIDE
DSQLPSRISKPGHSKSRSSHWNNEQIKEQTGSSLSLLRSLDKYARLMQKLEIVTVEFFKG
FCQLFGIFFHFVFETFGHQSIHPSGKAVTDTLSHRLKTALLRITHDCDQWMKPQSQSFSS
SSPSSSSTSFSHMDVTPTSPPSYLTGASLGLKERCAGADTIYVVARVLHRSKAHLQSLLQ
NNAALVEDFYVHLVDVVPDLVDHIHRTTARLLLHINGYIDRIANAKWEVKELGVEHNGYV
DLLLGEFKHYKTRLAHGGIRKEVQDLLLEYGVDNVAEILVEGLSRVKRCTDEGRALMSLD
LQVLINGLKHFISVDVRPKLQIVETFIKAYYLPETEFVHWSRAHPEYSKSQIVGLINLVS
TMKGWKRKTRLEVLEKIE
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaattcttctccgccttttcctttgattccacttgttctcttcaatggcggt
caattgagcgaaggtgggtttgaattatctaggtttttgtttttggggtctttgctcttc
tctcaaggaggcgacgacggtatggacttgtctaaagttggagagaagattttgagttcc
gttcgttctgctagatctcttggtcttctcccttcttcttctgatcgtccggagatgaaa
gttttccttcaggttcctgaacgagctgcagctgctgctgcacttgcacgtgttctagct
ggactacctcctcatcagagatacactctttcatcaagctcggaagaactgagctcaata
tatgggagcaaacctcctggtcaagttgttgaggagctggaggaagaattctatgaagag
gaatttgatcctgtcggacatattctggagcatatgccatctgaagagagtgaattagct
tacttggaagatcaggccactcttagattatcacagctggacagaatttctgagcgcttg
tctcggcatgttatggagcatcatgaagtaatggtgaagggaatggatcttgtgagacaa
ctagaaagagacttgaagattgcgaatgtcatttgcatgaatggtcgccggtatttaacc
tcttcaaggaatgaggtttcaagggatctcattgtctccaacaattctaaaagaaaacaa
gcactcttggatgttcttcctgtcctgactgagctacgccatgcactagacatgcaatca
acacttgaaactcttgtcgaggaaggaagattctcaaaggcattccaagtactatcagaa
tatttacaacttttggatacactgtcagagctttctgccgcacaagagatgagccgtggt
gttgaggtttggttagggaaaactcttcaaaagctggattcacttctattaggagtgtgc
caggatttcaaagaggagaactatgtaactgtagttgatgcttatgcactaattggagat
gtcgctggccttgctgagaagatacaaagtttctttatgcaggaggttctatctgaaacc
cactcagcgctgaagactactgtacaagaggatctggataacaacaatgtgaacagttct
aggctcacgtatagtgatctgtgcactcagatacctgaatccaagttcaggcaatgcttg
ctagcaacattagctgtactttttaggttgatgtgttcatatcatgcaatacagagcttc
cagcccgaggataaggaagatatttcgtcaccaagcacagagagagcgccaactttagcc
tctgttgaagacccaccaactacttctgttgcttcatccgacactgccatgcacggttca
tccaacataaattatagggttgaagaggcaagggatgatggaagtacagcatcaagcagt
ggatccccctggtttcagctgaggaaagatgctacgacctttgtttcacatacattactt
agaggtcgaaagaatctttggcaacttacaacaagtcgtgcagctgtcttgctttcttct
ccggctattcattcagctagcatccatcaattcttaataacttatgaagatttaaacatt
tttgtactggctggggaagctttttgtggaagtgaagcagttgagttcaggcagaaagtg
aaatctgtttgtgaaagttatttagctgctttccatcggcaaaatatatatgctctcaag
atggtgctggaaagggagcattggctgatattgccgccagagacgatcgaagtagtaagc
ttcgctgggcttgtcggtgatggagcagctttgatagtttcatctgagacctctccgaat
actcgactgctgcaagaacgcgagcctgtacatcctatccaaactaaatcctctaagaga
aatggattttcaagttggtttaagggtggaaatccatttctgccaaaactaaatggtagt
tccagggaaaacttggagtcttgtttgcctaatggatctgcaatgcaagaaagtggaaac
tccaatgaagattctttggataagagttctttgagaaacagtgatgtaaatcatgtcaat
gggaatactactttatcagaagatgaaaatgaagatcttcatgctgattttattgatgaa
gatagccaactacctagccggatttctaaacctggtcattcaaaaagtcgttcttcacat
tggaacaatgaacaaataaaagagcaaacaggatcatcacttagcctcctgaggtcactg
gataaatatgcaaggttgatgcagaagttagagattgttactgttgagttttttaaggga
ttttgccaattgtttgggatcttctttcacttcgtctttgagacctttggtcaccaaagt
attcatccaagtggaaaggctgtgactgacacgctgtcgcatagactgaagactgcatta
ttacgaataacacacgattgtgaccaatggatgaaaccccagtctcaatcattttcttcc
tcttctccctcaagctcaagtacatcattttctcacatggatgtcactcctaccagccca
ccaagttacttaactggtgcatccctgggactgaaggaaagatgtgcaggtgctgacact
atatatgttgttgctcgggtattacatagatctaaagcgcatcttcagtcactgcttcag
aataatgcagcactggttgaggatttctatgtgcatttggtggatgttgtaccggacctt
gttgatcatattcatagaacaactgctagattacttctccacataaatgggtatattgat
cggattgccaatgctaaatgggaggtgaaagagcttggagtagagcacaatggatatgta
gatcttttgcttggagaatttaagcattataaaacaaggcttgctcatggaggaattcgg
aaggaggtccaagacctcctcttagaatacggagtagataatgtggctgaaattctcgtt
gaaggcctatctcgggtgaagaggtgtactgatgaaggacgagctcttatgtcattagat
cttcaggtattgataaatggcttgaagcatttcatttctgtagacgtgagacctaaacta
cagatagttgaaacattcatcaaggcctactatcttccagaaaccgaatttgtgcactgg
tcacgtgctcatccggaatacagtaaaagtcagattgttggtctaatcaacctcgtctct
acaatgaaaggctggaagaggaaaaccaggttggaagtactggaaaagattgagtga
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