Solanum pennellii: 107004795
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Entry
107004795 CDS
T04130
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
spen
Solanum pennellii
Pathway
spen00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107004795
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spen01007
]
107004795
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107004795
Enzymes [BR:
spen01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
107004795
Amino acid related enzymes [BR:
spen01007
]
Aminoacyl-tRNA synthetase
Class II (U)
107004795
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
107004795
Prokaryotic type
107004795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
Cation_ATPase_N
Motif
Other DBs
NCBI-GeneID:
107004795
NCBI-ProteinID:
XP_015058636
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Position
1:complement(2704779..2718229)
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AA seq
592 aa
AA seq
DB search
MPTVSVGRDLLFEALGRTYTDEEFDELCFQFGIELDDITTEKAIQRKEKHLEEEGVEDDG
ETIYKIEVPANRYDLLCLEGLAQALRIFNGLDPIPTYKVANIGKESMLEMRVKTETSKIR
PYVVCAVLRGVTFDEAKYNSFIELQDRLHQNICRRRTLVAIGTHDLDTIEGPFTYEALPP
AEINFVPLKQTRNFRADELMEFYKSDLKLKKFLHIIENSPVYPVIYDCKRTVLSLPPIIN
GAHSAISLKTKNVFIECTATDLTKANIVLNTMVTMFSVYCERKFEVEPVKVTYPDGKSYV
CPDLSIYNMNVPLSYITGIIGVKLPEDKVASLLHKMQLRAEKSVSEDKEVKFVVSVPPTR
SDVLHPCDVAEDVAIAYGYNEIPKRKPASLNPLPLSQFSDLIRTEIAMTGYTEVLTWILC
SKKEIFSMLNREEDNSAVTIADSRTSEFEVVRPSLMPGLLRTVGHNKDHPKPIKIFEVGD
IVLLDDTKDVGAVNRRHLAALYCGANSGFELIHGLVDKIMEATGTNFVSPGNSTGYYIEK
SEEPAFLQGRQANVIYGGKRIGTFGIVHPKVLKEYDIPDVCSFLELDMQSFL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccgttagcgttggaagagaccttctgttcgaagcccttggccgtacttacact
gatgaagaattcgatgaattgtgctttcagtttggtattgagctcgacgatataacaaca
gaaaaagcaatacagagaaaagagaagcatttggaggaagagggagtggaagatgatgga
gagactatatacaaaattgaagttccagcaaacagatatgatttgctttgtcttgaagga
ctagcgcaagctcttcgaatatttaatggacttgacccgatcccaacatataaggtggcg
aatattggtaaagaatctatgcttgaaatgcgtgtgaaaacagagacatccaagattcgt
ccatatgttgtatgtgctgttttaagaggtgtaacatttgatgaggctaagtacaatagc
ttcattgaactacaagataggctgcatcaaaacatttgcaggcgaagaaccttggtggca
attggtacccatgacctagatacaattgaaggacctttcacgtatgaggctttgcctcct
gctgaaataaattttgtgccattgaagcagaccagaaacttcagagctgatgagctgatg
gaattttacaaatcggatttgaagctgaagaagtttctacacataatcgagaattcaccc
gtgtaccctgttatatatgattgtaaaaggactgttttgtctttaccccccattattaat
ggtgcacattcagccatttcgctgaaaacaaagaacgtgtttatagaatgtacagccaca
gatttgacgaaggccaacattgttctgaacacgatggtaactatgttttcagtgtactgt
gagcggaagtttgaagttgaaccagttaaagttacatatcctgatggaaaatcgtatgtt
tgtcccgatctttcaatctacaacatgaatgtgcctttgtcctacattactggcatcatt
ggagttaaattgccggaggataaggtggctagtttgttgcataaaatgcaattgcgtgca
gagaaatctgtatcagaagataaagaagtcaagtttgttgtatctgttcctcccacaaga
agtgacgttcttcatccatgtgatgtagcggaggatgttgcaattgcttatggctacaat
gagatcccaaagagaaaacctgcatctttgaatcctttacctctcagtcaattcagtgat
cttattcgtacagagattgcaatgactggttatactgaggtgttaacatggatcttgtgt
tccaagaaagaaattttctccatgttgaaccgtgaagaggataattctgctgtgaccatt
gctgattctcgtacgtctgaatttgaggttgttcggccttctctcatgcctggactattg
agaactgtgggccataataaggaccatccaaagcctataaagatttttgaagttggtgat
atagtcctcttagatgatacaaaagatgttggcgcagtaaaccgtcgccaccttgctgct
ctgtattgtggagcaaactcaggatttgagctaatacatggtctagttgacaaaatcatg
gaagcaaccggcactaattttgtatcacctggaaacagtacaggctactatatagaaaaa
tcagaggagcctgcatttcttcagggaagacaagctaacgttatttatggaggaaagcga
attggaacattcggcattgtgcaccctaaggtcctcaaggagtatgacattccagatgtc
tgctccttcctggagcttgacatgcagagtttcctatag
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