Solanum pennellii: 107004798
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Entry
107004798 CDS
T04130
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107004798
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107004798
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Pol_alpha_B_N
Motif
Other DBs
NCBI-GeneID:
107004798
NCBI-ProteinID:
XP_015058637
UniProt:
A0ABM1FLJ0
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Position
11:complement(5566053..5583937)
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AA seq
554 aa
AA seq
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MGDDAFDGPELAEKLSKLNSSKQSIESLSRWCISYRKKAKQIVETWDKSFRSAQREQRVS
FLYLANDIIQNSRRKGSEFVNEFWKVLPASLKKVNESGDGSVKKVASRLVNIWEERKVFG
SKGQNLKDEVLGKSPAPSESKGKSSNPIEVVKKDAHSVRIKMAVGCTPEKIVTAFQLVHD
ENVNEEDALNKCKHSVFCVGEMENDIENRSSQGNLQGSELMDKLLEQENILQECISHFEN
AESLRITLISLLKDALQDQESKLELLRSGMQVACGQIELVKNARRRLTSPSVAAPPVNTG
ILPIEVTRTTEPTPPSVQLINIPPLPPPPNPVTSFTNSKSNEEESKSSAAAAVAAKLAAS
TSSAQMLTSVLSSLVAEEAASLSSGLKSTGFTSSLPFASPEKRLKLDKPMTFSDMNSSER
GSSTYFTSSQQLLTSIPLAPSSAMQSVSQPNQIQAPLPPPPPPPPSLHPANSPASQLVQS
TGMMMGVMPYGYSTGLQQPVSSQIAMGLRPPPPPPQQAQLQSQQQPANSGFYRPSGIGFY
GQAHQQTAPAAPRQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgatgcttttgatggcccggaattggcagaaaagttgtccaagcttaacagt
tcaaaacaaagcatagaatctttatctcgatggtgcatttcatatcgtaagaaagccaag
cagatcgttgaaacatgggataaatcattcagatctgcacagcgggagcaacgtgtttcg
tttctgtacttagccaatgatattatccaaaatagtcggcgcaagggtagtgagtttgtt
aatgagttctggaaggtccttcccgcgtctctgaagaaggttaatgaaagtggtgatgga
agtgtgaagaaagtggcttctagactggttaatatatgggaagagagaaaagtatttgga
tccaagggtcagaatcttaaagatgaagtgttgggcaagagtcctgctccttcagaaagc
aaagggaagagctcaaatcctatcgaagttgtgaagaaggatgctcactcagtaaggatt
aaaatggctgtcggctgtactccagaaaaaattgtaacagcattccaactagttcatgat
gaaaatgtgaatgaggaagatgctttgaacaagtgtaaacattctgttttttgcgttggg
gaaatggagaatgatattgaaaaccgttcttcccaaggaaacctccagggttctgaactg
atggataaattgctagaacaggaaaatatacttcaagaatgcatcagccactttgagaat
gctgaatcattgagaattaccttgatttctctcctgaaagatgcacttcaagatcaagaa
tctaagctagagcttttacgcagtgggatgcaggttgcgtgtggtcagattgaactagta
aaaaatgcaaggaggaggctgacatctcccagtgttgctgctccaccagtgaatactggt
atccttccaattgaagtcaccagaacgactgaaccaaccccgccttcagtgcaattaatc
aacatacctcctctgcctccacctcccaatcccgtgacttccttcacaaattccaaaagt
aatgaagaggaaagcaaaagttcggcagcagcagctgttgctgcaaaacttgctgcttca
acatcttctgctcaaatgttaacctctgttctttcatcccttgttgctgaagaagctgca
tcactgagcagtggattgaaatcaactggcttcacttctagcttgccttttgcatcccca
gagaaacggctcaaattagataagccaatgactttttctgatatgaacagttctgaaagg
ggtagctccacttactttacttcatctcaacaattgcttactagcattcctcttgcccca
tcctcagccatgcaatctgtgtcccagccaaaccagatacaagctccgcttccacctcct
ccccctccccctccatcattacatccagcaaattcccctgcaagtcagttagttcaatct
acaggtatgatgatgggggtgatgccatatggatatagcactggccttcaacaacctgtg
tcttctcaaattgcaatgggactgaggcctcctcctccaccaccccagcaagcacagcta
caatctcagcagcagcctgccaacagcggattttaccgtccttctggtattggattctat
ggacaggcccatcagcagacggctccagcagcaccgcggcagtaa
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