Solanum pennellii: 107004812
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Entry
107004812 CDS
T04130
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
spen
Solanum pennellii
Pathway
spen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107004812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107004812
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
spen03037
]
107004812
Enzymes [BR:
spen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107004812
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
107004812
Chromatin remodeling factors
SRCAP complex
107004812
INO80 complex
107004812
INO80 complex (yeast)
107004812
SWR1 complex
107004812
ASTRA complex
107004812
Cilium and associated proteins [BR:
spen03037
]
Motile cilia and associated proteins
Dynein assembly factors
107004812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_19
AAA_18
Mg_chelatase
bpMoxR
AAA_25
TsaE
DnaB_C
AAA_7
AAA_28
AAA_11
nSTAND3
NPHP3_N
Zeta_toxin
IstB_IS21
Rad17
Motif
Other DBs
NCBI-GeneID:
107004812
NCBI-ProteinID:
XP_015058659
UniProt:
A0ABM1FLL0
LinkDB
All DBs
Position
11:63763522..63769062
Genome browser
AA seq
455 aa
AA seq
DB search
MKIEEVQSTIKNQRIATHTHIKGLGLEPNGTPLPLAAGFVGQAAAREAAGLVVDMIRQKK
MAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAI
GLRIKENKEVYEGEVTELSPEEGESLTGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDAL
IKEKVAVGDVIYIESNSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTL
HDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYVDEGVAELVPGVLF
IDEVHMLDMECFSYLNRALECSLSPIVIFATNRGICTVRGTDMTSPHGIPLDLLDRLLIV
RTETYGPAEMIQILAIRAQVEGLEIDEESLAYLGEIGQQASLRHAVQLLSPASVVAKMNG
RDKICKVDLDEVNSLYLDAKSSARLLQEQQDRYIS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgaagaggtgcaatcaacaatcaagaatcagagaattgcaactcatactcac
attaaaggccttggtcttgagcccaatgggacaccactaccattggcagctgggtttgta
ggtcaggcagcagccagagaagctgcagggcttgtggttgatatgatacgccaaaagaag
atggctggtcgggctttactgctagctggtccgcctggtacagggaagacagctcttgcc
cttggtatatcacaagaacttggaagcaaggttccattttgcccaatggtcggatccgaa
gtgtattcatcagaagtgaagaaaactgaggttttaatggaaaatttccgacgtgctatt
ggtctccgtatcaaggaaaataaggaagtttatgaaggagaggtgactgaactatctcca
gaagagggtgagagtttgacaggtggatatggtaaaagcattagtcatgttataattggg
ttaaaaactgtcaaaggtaccaaacagctgaagctagaccccacgatatatgatgccttg
attaaagagaaggtagctgttggtgatgtcatttacattgaatcaaacagtggagcagtt
aaaagagtgggtaggagtgatgcttttgctacagaatttgatcttgaggccgaggagtat
gttccacttcctaaaggagaggttcacaagaagaaggaaatagtccaggatgttacattg
catgatcttgatgctgcaaatgcacggccacaaggaggacaagatatattgtccctaatg
ggtcaaatgatgaaacctaggaaaaccgagattactgacaagttgcggcaagagataaac
aaggttgtcaatcgttatgttgacgaaggtgttgcagaacttgttcctggtgtcttattt
attgatgaggttcatatgcttgatatggaatgtttttcatacttgaatcgtgccttggaa
tgttcactgtctccaattgtgatttttgccactaacagaggcatttgtactgtcagagga
acagacatgactagtccacatggcattccacttgacttgttagatcggttgttgattgtc
agaacggaaacttatggtccagctgaaatgatacagatattagctatacgtgctcaggtg
gagggactagaaatagatgaagagagccttgcgtatttgggagagattggacaacaagct
tctttaaggcatgctgttcagctgctatctccagctagtgtagtcgccaaaatgaatggt
cgtgataaaatctgcaaggtggatctcgacgaagtgaattcattgtacctagatgctaag
tcttctgcaagacttcttcaagagcagcaggatagatacatctcataa
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