KEGG   Solanum pennellii: 107004841
Entry
107004841         CDS       T04130                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
spen  Solanum pennellii
Pathway
spen03030  DNA replication
spen03410  Base excision repair
spen03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107004841
   03410 Base excision repair
    107004841
   03420 Nucleotide excision repair
    107004841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spen03032]
    107004841
   03400 DNA repair and recombination proteins [BR:spen03400]
    107004841
Enzymes [BR:spen01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107004841
DNA replication proteins [BR:spen03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    107004841
DNA repair and recombination proteins [BR:spen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      107004841
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 RNase_H_2 DNA_pol_B_exo2
Other DBs
NCBI-GeneID: 107004841
NCBI-ProteinID: XP_015058702
LinkDB
Position
11:62605317..62645155
AA seq 2218 aa
MNTAESSRRWDRRDSRFSKKQKLTLNSEEQLESKLGFDVFTEGDKRLGWLLTLASSSWED
QETRKVYSCVDLYFVCQDGSTFKAKYKFRPYFYVATKDKMEMDVDSYLRRRYESQIADIE
VLEKEDLDLKNHLSGLHRSYLKISFDTVQQLMDVKRDLTHIVERNQTKFDTIEAYESILT
GKSKQRSQDFIDYITDLREYDVPYHVRFAIDIDVRCGQWYDVSVSSSGVVLEKRTDLLQR
AEVHVCAFDIETTKLPLKFPDAEYDSIMMISYMVDGQGYLIINREYVGEDIEDIEYTPKP
EYEGHFKVTNVKNEEGLLRHWFAHMQVAKPGIYVTYNGDFFDWPFVETRATHYGLSLKDE
LGFSFDKNQGECRAKYACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV
RFAKEKPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLL
MVQAYKANVICPNKHQSDPEKFYGSQLLDSETYIGGHVECLESGVFRSDIPTSFKLDPSA
YELLISNLDRDLQYSIVVEGKMDLQSVTNYDEVKNAIMEKLMSLRDDPLREECPLIYHLD
VAAMYPNIILTNRLQPPSIVSDEICTACDFNRPGKKCLRKLEWVWRGEIYMAKRSDYYHI
KRQLESELVEVGDGQRSKSFLDLPKAEQQVKLKDRLKKYCQKAYKRVLEKPVTEVREAGI
CMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVVYDSLQL
AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWC
ALPGSFPENYTFKTKDPKKKLTISYPCVMLNVDVARNNTNDQYQTLKDPINKTYTIHSEC
SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQA
ELFDKFLHGSTLEECYSAVAAVADRWLDLLDNQGQDIADSELLGYISESSTMSKSLADYG
EQKSCAVTTAKRLADFLGDAMVKEKGLLCQYIVACEPKGTPVSERAIPVAIFETNAEIMR
YYVKKWCKISSEIGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLHK
KVREKEDKFRQRKLNDIFSSVNKDDTMASKHSKNQQNFEDLEDFRLSGKSSIFGPRPVVH
RHGVNKEHLVNTSDRLDSQQQNGQASSPSKMLPSQEIADVEDIDRNVDYHGWLQQKKRKW
KEIREERKRQRLDTSSTVNHVNGSTDMFHSMANRKCQGKTGVNSYFERHELAFTRNHWQI
VQLEPTSQHGQFFAWVVVEGVMHKISVTIPRVFYLNSKAPITEEFPGRRVNKILPHGRHS
YNLIEVTIDEDQFKSESKKLAAHLADPEVEGIYEAKVPLEFSAILQMGCVCKVDKATKKR
NPQDGWSLSELHMRTTTECPYLEQSIAFFYLYHSVSDVRAIFVGHFPASKMIHVVVVNPF
QNKELSQNVLERHFHEACRTFSGQPITQKEGISFKLDYVGYIKDAERILQRAVNEHRHHG
PAVAMIECPNAHLLKSGIRALEDFPCISIPCNARDSQYQALGWQNVAAKIGMQRCATSSQ
WLNERISLSRYAHVPIGNFDVDWLMHTADIFFSRALRDQQQVLWISDNGIPDLGGINDEV
SSFMDEVNQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGTLFGLDQDLNPTA
NFTNEQYFFDATTSCAPAFRVLKQLIQRCLTDAVTSGNIFADAMLQHLYRWLCSPRSRLH
DPALHSMLHKVMQKMFALLVAELRKLGAAIVFADFSKIIIDTGKSDIFAAKAYCDNVIKN
VQSRELFEWIELEPLQFWHSLLFMDQYNYGGIQARHSDEPLEVNSEPGEESVCGESQVDI
VSSWNIAENLPKATQDHFILIVSEFMYGPWKYAQEQATHRASTSDGDLCTPSITAAHAET
FDLQMAEDLKKKIGTYFTDKLLKIVCDPNLQMKAMDNSQKIQETPDANSQSISHVQKGDP
ALEFIKHVCAVLALDQNVQHEVLIMRKNLLKLVRVREFAPEAEFRSLSVSYTLPNVICSY
CNDCRDLDLCRDRALISQEWRCAVPQCGQPYDRETMENALVQIVRQRERLYHLQDLVCLK
CHQVKAAHLSDHCACAGSFICKEDVSDFRNKMQVFLNIAVNQKFQLLEECTSWILEAR
NT seq 6657 nt   +upstreamnt  +downstreamnt
atgaataccgctgaaagtagccggcgctgggaccggcgggactctaggttttcaaagaag
cagaaactcacacttaactccgaagaacagctcgaatccaagctaggattcgatgttttc
actgaaggagataaacgactcggctggcttcttactcttgcctcttcgtcatgggaggat
caggagactcgcaaagtgtacagttgtgtcgatctttattttgtttgtcaggatggttca
acattcaaagcaaagtacaaattcaggccatatttttatgtggcaacaaaggataaaatg
gaaatggatgttgactcatatctgagaaggcgatacgaatctcaaatcgcagatattgaa
gttttagagaaagaggatcttgatcttaaaaaccatctgtctggcctacacagatcatat
ttaaagatatcatttgacactgtccaacagttgatggacgtgaagcgtgatctaacacac
attgttgagagaaatcaaacgaagtttgatacaatagaagcatatgaatctatactgacg
gggaaaagcaagcagcgaagtcaagattttatagattatatcactgatctacgtgaatat
gatgtcccctaccatgttcgctttgccattgacattgatgttcgatgtggtcagtggtat
gatgtgagtgtatctagctccggtgttgtgttggagaagaggactgatctcttgcagcga
gctgaagttcatgtttgcgcctttgatattgaaaccacaaagcttcctcttaaatttcct
gatgccgaatatgattccataatgatgatctcatacatggttgatggccaaggctatctc
attattaacagagagtatgttggggaagatattgaggatatagagtataccccaaaacca
gaatatgaagggcattttaaagtgacaaatgtgaaaaacgaggaagggctccttaggcac
tggttcgcacacatgcaagtggcgaagcctggtatctatgtaacatataacggtgacttc
tttgattggccatttgttgagacaagagctactcattatggcttgagcctcaaggatgag
cttgggttttcctttgacaagaatcaaggggaatgtcgtgctaaatatgcttgccatctg
gactgttttgcttgggtcaaacgtgatagttatcttcctcaaggaagccaaggtctgaag
gctgtaacgaaggccaagttgggttatgaccctctagaagtcaatcctgaggatatggtt
cgctttgcaaaggaaaaaccacagatgatggcttcatattctgtttcagatgctgtttca
acatactacttgtacatgacttatgttcatcccttcattttctcccttgcaaccataata
cccatgccgccagatgaagtcttgcgcaaaggaagtgggactttgtgtgaaatgcttctt
atggttcaggcttataaggcaaatgttatctgtccaaacaagcaccagtctgatccagag
aagttttatggtagtcaactccttgacagtgagacatacattggtggtcatgtggaatgc
ctagaaagtggtgtattcagatctgacatcccaaccagttttaaactcgatccctctgcc
tatgagctattgatcagcaaccttgatagagatctgcagtattctattgtagttgagggg
aagatggacttgcagtctgtcacaaattatgatgaagtgaagaatgccatcatggaaaag
ctaatgagcttacgagatgatcctttaagggaagaatgccccctcatatatcatcttgat
gtagctgccatgtatccaaacatcatacttacaaataggcttcagccaccatcaatagta
tcagatgagatatgcactgcatgcgattttaatcgtcctggcaaaaagtgtctccggaag
cttgaatgggtttggcgtggtgaaatatacatggcaaaaaggagtgattattaccacata
aagagacaactcgaatctgaacttgttgaagtaggagatggtcaacgatcaaagtctttt
cttgatttgcctaaagcagaacaacaagtaaagctcaaggaccgtttaaagaaatactgt
caaaaggcatataaaagagttcttgaaaagccggtcacagaagttcgagaagcagggatc
tgcatgcgagaaaatcctttttatgttgatactgtacggagtttccgagataggaggtat
gaatacaaagggctcaataaagtttggaaaggtaagctgtctgaagcaaaggctagtgga
aattccataaagattcaagaagcacaggacatggtagttgtgtatgattcattgcagctg
gctcataaatgcattttgaactccttttatggttatgtcatgcgcaagggtgcgagatgg
tactcaatggagatggctggagttgtcacatatactggtgcaaaaatcattcagaatgct
cgattgttggttgaaaaaattggaaagcccctcgaattagacacagatggtatttggtgt
gcattaccaggctctttcccggagaattataccttcaagacaaaagatccaaagaagaag
ctgacaatatcttatccttgtgtaatgctgaatgttgatgtggcaagaaacaataccaat
gatcagtaccagacgctcaaggaccccatcaataagacatatacaatacacagtgaatgc
tcaattgagtttgaagtggatggaccatataaggcaatgattcttcccgcttccaaggaa
gaaggtattctaataaagaagcgatatgcagttttcaatgatgatggtacacttgccgaa
cttaaaggttttgaaattaaacgtagaggtgagctaaagctcataaaagtatttcaggct
gagctttttgataagttcctccatggatcaaccttagaggaatgctattcagcagttgct
gctgtggcagatcggtggcttgacctgcttgataatcaaggccaagatattgcagacagt
gagttgcttggatatatatctgaatcaagcacaatgagcaagtccctagccgattatggt
gaacaaaagtcatgtgcagtaactactgctaaacggcttgctgattttctaggggatgcg
atggtcaaagagaaaggattgctttgtcaatatattgttgcatgtgagccaaagggaacc
ccagtaagtgaacgtgctattcctgttgcaatatttgaaactaatgctgagatcatgagg
tactatgtcaaaaagtggtgcaaaatatcatcggaaatcggaatacgctccattattgat
tggtcttattacaagcaacgactcagttcagcaattcaaaagattatcacaattcctgct
gcaatgcagaaggtttcaaaccctgtcccaagggtggttcatcctgattggctgcataag
aaggttcgtgaaaaagaagacaaatttcgccaacgaaaattgaatgatatcttcagttca
gtgaacaaagacgacacaatggccagtaaacattctaaaaatcagcaaaattttgaagac
ctggaagactttagactcagtggtaaatcgtctatatttggtccaaggcccgttgttcat
cgtcatggagtcaacaaagaacatctagtgaacactagtgatcgattggacagtcaacag
caaaatggtcaagctagcagtccatccaagatgttaccatcacaagaaattgctgatgtg
gaagatattgacaggaatgtagattatcatggatggctacaacaaaaaaagagaaaatgg
aaagagattcgtgaagaaaggaaacgccaaaggttggatacgtcgagtacagtaaaccat
gttaatggcagtactgacatgtttcatagcatggcaaatcgcaaatgtcagggtaaaact
ggggttaattcctactttgagcgacacgagttagccttcacacgtaatcactggcagata
gttcagcttgaaccgacttcacaacatggacaattttttgcatgggtagttgtggaagga
gtcatgcacaaaatttcagtaactatccccagagtgttttacctcaactccaaagctcct
ataactgaggaatttcctggaagacgtgtcaacaagattcttcctcatggacgccatagc
tataatttaattgaggtcactattgatgaggatcaattcaagtcagaaagcaaaaagcta
gcagctcaccttgctgacccagaagtggagggaatatatgaagcaaaggttccgttagag
ttcagtgctattcttcagatgggttgtgtttgtaaagttgataaagcaactaagaaaagg
aatccacaagatggttggagtttgagtgagctgcatatgaggacaacaactgagtgcccg
tatttggagcagtcaatagctttcttctacttatatcatagtgtatcggatgtacgagcc
atttttgtgggacattttcctgcgtccaagatgatacatgttgtggttgttaatccattt
caaaacaaggaattatcacaaaacgttctcgaaagacattttcatgaagcttgccgaaca
ttctctgggcagcctatcacacaaaaggaaggtattagtttcaagttggattatgtcggg
tacatcaaggatgctgagaggattctacagagagcagttaatgagcataggcatcatgga
cctgcagttgccatgatcgagtgccctaatgcccatttactgaagtctggcatacgggct
ttggaggattttccttgcatcagtatcccttgtaatgctcgggatagtcaatatcaggca
ctaggttggcaaaatgtagcagcaaagattggaatgcagcgatgcgcgacatcctcccag
tggttaaatgaaaggatctctctctcaagatatgcccatgttcccatagggaattttgat
gttgattggctcatgcatacagcagatatcttcttttccagagcacttcgtgatcagcaa
caggtcttgtggatatctgataatggaatccccgacttaggaggcataaatgatgaagta
tcatcgtttatggatgaggtgaatcaaccagttcttacttatcctggtgcatatagaaaa
gttactgttgagctgaagattcatcatctggctgttgatgctctactgaaaagcaaccaa
gtaaatgaaatggaaggaggcactctgtttggattggaccaggacttgaaccctacggcg
aattttactaatgaacagtacttctttgacgcaacaacatcctgtgcaccagcatttcgt
gtacttaagcagttgattcaaaggtgccttacagatgcagtaacatcaggaaacatattt
gctgatgccatgctgcaacatttgtaccgatggctctgcagcccccgatctagactgcat
gacccagctcttcacagtatgcttcacaaggttatgcaaaagatgtttgcattgcttgtg
gctgaactccgaaaattgggtgctgctattgtgtttgccgacttctcaaaaatcattatt
gacactgggaagtcagatatttttgctgccaaagcctactgtgataatgttattaaaaat
gtacaatcaagagaattgtttgagtggattgaacttgagccgttgcagttttggcactca
ttgcttttcatggatcagtacaattatggcggaattcaagctagacatagtgatgaacct
ttagaagttaactcagaaccaggtgaagaaagtgtttgtggtgaatctcaagttgatatc
gtgtcaagctggaacattgcagaaaatttaccgaaggcaactcaggatcacttcattttg
attgtttcggagtttatgtatggtccatggaaatatgcacaagaacaagctacacatcga
gcatctactagcgatggtgatttatgtacaccatcaatcactgctgcacatgctgaaaca
tttgatttgcaaatggcagaagatctaaagaagaagattggaacttacttcactgacaaa
cttctgaaaattgtttgtgaccctaatcttcaaatgaaagcgatggacaactctcagaag
atccaggagacaccagatgcaaactcacaatctattagccatgtccaaaagggggatcca
gctttagagttcattaagcatgtctgtgcagttttggcccttgaccagaatgtgcagcat
gaagttctgatcatgaggaaaaatttattaaaacttgttcgtgtgagggaattcgctccg
gaggcagaatttcgtagtctttctgtatcatatacccttccaaatgtcatttgcagttac
tgcaatgactgcagagaccttgacttgtgtcgagacagagctttgatttctcaggagtgg
cgttgtgctgtgccccagtgtgggcaaccttatgatcgtgaaacaatggaaaatgctctt
gttcaaattgttcgacagagagagaggctataccaccttcaggatctagtatgcctaaaa
tgtcaccaggttaaagctgcacatttatcagatcactgtgcttgtgccggatcatttatc
tgcaaggaagatgtctcagatttccgcaataaaatgcaagtcttcttgaacattgccgta
aatcaaaagttccaattgctcgaagaatgtacttcttggattttggaagccagataa

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