Solanum pennellii: 107005048
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Entry
107005048 CDS
T04130
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
spen
Solanum pennellii
Pathway
spen00280
Valine, leucine and isoleucine degradation
spen00650
Butanoate metabolism
spen01100
Metabolic pathways
spen04146
Peroxisome
Module
spen_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
107005048
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
107005048
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107005048
Enzymes [BR:
spen01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
107005048
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GFIT
Motif
Pfam:
HMGL-like
DNA-PKcs_N
Motif
Other DBs
NCBI-GeneID:
107005048
NCBI-ProteinID:
XP_015059001
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Position
11:60046985..60052046
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AA seq
430 aa
AA seq
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MSSLEEPLNLERLPSLSNIDWVERFSSGACRPAGEDMAMGDSWSDGRNCSSSNSCVEDND
EYGRENFKWRRHGSRNVISSRRSKNLSKNYIVCGTVSRSQCSTDRQPKSYSNHRSTVRKT
FKLFNGMPNHVKIVEVGARDGLQNEKKTVPTSVKVELIQKLVSCGLPVVEVTGFVSPKWV
PQLSDAKDVMEAVKDLEGARLPVLTPNMKGFEAAVAAGAKEVAVFASASESFSKSNINCS
IEESLVRYRAVTSAAKKLAIPIRGYVSCAIGCPVEGAISPSKVAYVAKELHDMGCFEISL
GDTIGIATPGTVVPMLEAVMAVVPVEKLAVHFHDTYGQSLSNILVSLQMGISTVDSSVAG
LGGCPYAKGASGNVATEDVVYMLNGLGIKTNVDLQKLLLAGEFISKHLDRPSGSKAAIAL
SGVTADASKM
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcttggaagagcctcttaacctcgaaaggttgccaagtttgagcaacattgat
tgggtagagaggttctcatctggtgcctgcaggcctgcaggagaagatatggcaatggga
gactcctggtctgatgggagaaattgcagctcttccaacagctgtgttgaagataatgac
gaatatgggagagagaactttaaatggagaaggcatggatcacgcaacgtcatttcaagt
cgaagatcaaagaatcttagcaagaattatatagtatgtggaactgtgtctcgttcacag
tgttcgacagatcgtcaacctaaatcttacagcaaccacagaagcacagtgagaaaaacg
ttcaagttgttcaatggcatgccaaatcatgtgaagatagtggaagttggtgcaagggat
ggattacaaaatgagaagaaaactgttcctacatcagtgaaggttgaattaattcaaaaa
cttgtctcttgtgggctacctgtcgttgaagtgacgggttttgtttctccaaaatgggtg
cctcagctgtcggatgccaaggatgtaatggaagcagttaaggatctggaaggtgccaga
ttgcctgtactgacacctaatatgaaaggctttgaagcagctgttgcagctggggcgaaa
gaagtagcagtctttgcatcagcttcagagtctttctcaaagtcaaacattaattgcagc
attgaggagagccttgtccgatatcgagctgttacatctgctgccaaaaagctggcaata
ccaattcgcggatatgtatcctgcgctattggatgcccagtcgaaggagcgatttcacct
tcaaaagtggcatatgtagcaaaggaacttcatgacatgggatgttttgaaatttccctt
ggagacacaataggaatcgctactccaggaactgttgttcctatgcttgaagctgtgatg
gctgtggttcctgttgaaaaacttgctgtgcattttcatgatacctatggacagtctctt
tcaaatattttggtttccctccaaatgggtattagcacagttgactcctcagttgctggt
ctaggaggctgtccatatgccaaaggagcttctggcaatgttgcaacagaagatgttgtc
tacatgctcaatggtctaggcattaaaaccaatgtcgatctacagaaactcctgctagcc
ggggagttcatcagcaagcatttggaccgcccatccggatccaaagcagccattgctttg
agtggagtaacagcagatgcatccaagatgtag
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