Solanum pennellii: 107005179
Help
Entry
107005179 CDS
T04130
Name
(RefSeq) 4-coumarate--CoA ligase-like 5
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
spen
Solanum pennellii
Pathway
spen00592
alpha-Linolenic acid metabolism
spen01100
Metabolic pathways
spen01110
Biosynthesis of secondary metabolites
Module
spen_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
107005179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
107005179
NCBI-ProteinID:
XP_015059189
LinkDB
All DBs
Position
12:complement(80531774..80535733)
Genome browser
AA seq
551 aa
AA seq
DB search
MAQYNNNSTVDPKSGYSPANSTFYSKRRPIPFPANESIDVTTFISSRAHSGKIAFIDATT
GRKLSFSDVWNAVESLATSLSVDMSIRKGDVVLLLSPNSIFFPIVCLAVMSLGAIITTTN
PLNTNSEIAKQIKDSNPVLAFTIPQLLPKLTGSNLPVILIDGVNDSNSNLKIVGVLQKLI
QRKPSESRLKERVTQDDVATLLYSSGTTGASKGVISSHKNLIAMVQTIVSRFNLDEGVQT
FICTVPMFHIYGLAAFAAGLLASGSTVVVLSKFEMDEMLSSIHKYKATSLPLVPPILVAL
VNNADWIKKKYDLSSLASVLSGGAPLSKEVIEGFVEKYPSVRILQGYGLTESTGIGASTD
SLEESRRYGTAGMLSPSMEGKIVDPESGKALPVNKTGELWLRGPTIMKGYFSNEEATAST
LDSDGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVPPAELEALLLTHPEISDAAVIP
FPDKEVGQFPMAYVVRKTGSTLSESAVMDFIAKQVAPYKRIRRVAFVASIPKNPSGKILR
KDLIKLATSKL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtataacaataattcaaccgtcgatccaaaatccggctattctccggcgaat
tcaactttctacagcaaacgtagaccaattccgtttccggcgaatgaatctattgatgta
acaactttcatttcttcacgagcacatagcgggaaaatcgctttcatcgatgctacgact
ggtcggaaactcagtttctccgacgtatggaacgccgttgagtcgttagctaccagttta
tcagttgatatgagtattcgtaaaggtgacgttgttcttctcctttctcctaattccatt
ttcttccctattgtttgtctcgccgttatgtcactcggagctataatcactacaacaaat
ccactcaacacgaacagcgaaatcgctaaacagatcaaggattcgaatcctgttctcgct
tttacaatccctcaactactcccgaaactcaccggatctaatctcccggtgattttaatc
gacggagtgaatgattcaaattcgaatctcaaaatcgttggggttttacagaaattgatt
cagagaaaacctagtgaaagcagattgaaagagcgagttacacaagacgacgtagctact
ctgctttactcatctggtactaccggagcaagcaaaggagttatttcatctcacaaaaac
ctaatcgccatggttcaaactatagtcagtcgattcaatctagatgaaggtgtacaaacc
ttcatttgtactgtacctatgtttcatatttacggattagcagcgtttgcagctgggtta
ttagcatctggatctactgttgttgtattatcaaaattcgaaatggatgaaatgctctca
tcgattcacaaatacaaagcaacttctctaccattagtgcctccaattctcgttgcgctt
gtgaataacgctgattggattaagaaaaaatatgatttaagcagcttggcgagtgttctc
tccggcggtgctccgttgagtaaggaagtgattgagggatttgtagagaagtatccatct
gtgaggattttgcaagggtatgggttgacagagtctaccggaatcggggcgtcaacggat
tctttggaggagagccggagatatggaacggcgggaatgttgtcgccgagcatggaaggg
aaaattgttgatcctgagagtggaaaagctttgccggtgaataagaccggtgagctttgg
ctaagaggacctaccattatgaaaggttatttcagtaatgaagaagctactgcttccact
ctagactctgatggatggttaagaactggagatctatgctatatagatgaagatggtttc
atttttgtggttgatagattaaaggagctcatcaaatataaaggttatcaggttcctcca
gcagagttagaggctttattgctcactcatccagaaatttctgatgctgctgttataccg
tttccggataaggaggttggacagtttcctatggcatatgtagtacgtaaaactggaagt
actctatcagagagtgcagtcatggatttcatcgcgaaacaggttgctccatataagaga
attcggagagttgcatttgtggcttccataccgaagaatccttctgggaaaatacttagg
aaggatttgataaagttagcaacatcaaaactctga
DBGET
integrated database retrieval system