Solanum pennellii: 107005201
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Entry
107005201 CDS
T04130
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107005201
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107005201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
107005201
NCBI-ProteinID:
XP_015059217
LinkDB
All DBs
Position
12:complement(82159471..82172509)
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AA seq
691 aa
AA seq
DB search
MDFDDWELSAEELDKLERDALRQIAERNASSSSATTSSCLQSSRLQGDVNGSGVSYKRED
VLSAAPIIRPSSGYDKGSGKSSVGNSGPHNDNHVKQLTEKRYAKFFLHASGNIAAKFSYD
QILVEACRKIPKATWSAKERLWMFPLSSLSVAEKVFHEISGSNLELENLDPLVQRAIAAA
SVMPDLRDHYEFIPNSIETKLLPFQREGVKFALQHGGRILLADEMGLGKTLQAIAVVSCV
RESWPVLVLAPSALRLHWASMIQQWMNIPSSEILVVLSKSSGSNKGGFKIVPPNTKKSIH
LDGVFNIVSYDTVPKLQDLLMASTFKVVIADESHYLKNAQAKRTSASLPLLQKAQYVILL
SGTPALSRPIELFKQLEALHPTVYKNVHEYGNRYCKGGIFGVYQGASNHEELHSLIKATL
MIRRLKKDVLSELPQKRRQQVFLNLGEKEMRQVNALFRELEVIKAKGKSAQSEEEANSLK
FAEKSLISKIYTASAEAKIPAVLDYLGTMVEANCKFLIFAHHQSMIDSIHEYLLKNKVGC
IRIDGSTPSALRQDLVTDFQKKETIKAAVLSIRAAGVGLTLTAASTVIFAELSWTPGDLI
QAEDRAHRIGQVSSVNVCYLLANDTVDDIIWGSVQSKLDNLGQMLDGQEKSLEVSTNQSH
SSSSKQNTLDSFIKRCNNSPPQDPSKKHCLQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgattgggaattgagtgcagaggaattggataaacttgaaagagatgcc
ctaaggcaaattgctgagcgaaatgcatcttcttcttctgctacgacgagttcctgtttg
caatcatctcgccttcaaggagatgttaatggttctggggtttcatataaaagggaagat
gtgttatctgctgcacctataataagaccttcatcaggatatgataagggctctgggaaa
agctctgttggaaattctgggcctcataatgacaatcacgtgaaacagctaacagaaaag
cgctatgctaaatttttccttcatgcaagtggaaatattgctgcaaagttttcatatgac
cagatacttgttgaagcttgccgtaaaatcccaaaagctacttggagtgcaaaagagagg
ttgtggatgtttcctttgtcatcgttgtctgtagcagaaaaagttttccatgaaatttct
ggctccaatctagagttggagaatttagatcctctggtgcaacgtgccatcgctgctgct
tctgtgatgcctgaccttcgagatcattatgaatttattccaaatagtattgaaacaaag
ctgttgccttttcaacgggaaggggttaaatttgcattacaacatggagggcgtatcctg
ttggctgatgagatgggacttggaaagactcttcaggctatcgctgtggtttcatgtgtc
cgtgaatcatggccagttcttgttcttgctccatctgccttacggcttcactgggcttcg
atgattcaacagtggatgaacatcccgtcatcggaaatacttgtagttttatctaaaagc
agcggttcaaataagggaggatttaaaatagttcctccaaacactaagaagtccattcac
cttgatggtgtgttcaacatagtatcatatgacactgtacctaagcttcaagatttactt
atggcatcaacgtttaaggttgttatagcagatgaatcacactacttgaaaaatgcccaa
gcaaaaagaaccagtgcttcccttcccttattacagaaagctcagtatgtgatattgctc
agtggaactcctgctttatcaaggccaattgaactattcaaacagctcgaggccttgcat
cctactgtatataagaacgtgcatgaatatggcaaccgctattgcaagggtggcatcttt
ggagtttatcaaggtgcaagtaatcacgaagagctgcacagtttaatcaaagcaacactg
atgattcgacgactgaaaaaggatgtcctttctgaactccctcagaagcggaggcaacag
gttttcctaaacttgggggagaaggagatgagacaagttaatgctctatttcgtgagttg
gaggtcattaaggcgaaaggtaaatcagctcagtccgaggaggaggctaattctcttaag
tttgcagagaagagcctcatcagtaagatttacactgcctccgctgaggccaaaattcca
gcagttttggattacctaggaaccatggttgaggcaaactgcaagttcctgatatttgca
catcatcaatcaatgattgattcaatacatgagtatttacttaagaataaggttggttgt
attaggattgatggcagcactccatcagcattacgacaagatttggtgacagattttcag
aaaaaagaaacaattaaggctgcagtgctttccatcagagctgcgggagttggattaacg
ttaacagcagcaagcacagtgatatttgcagaattatcatggacaccaggtgaccttatt
caagccgaggatcgagctcacagaattggccaggtgtcctctgtcaatgtgtgttatctg
ctggcaaatgacactgttgatgacataatttggggttccgttcagagcaagcttgacaac
cttggacagatgcttgatggccaggagaaatcattggaagtttcgactaatcagtcccac
agcagctcttcaaaacagaataccctcgactccttcataaagcgctgtaataactcacca
cctcaggatcccagcaaaaaacattgtcttcagtag
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