Solanum pennellii: 107005248
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Entry
107005248 CDS
T04130
Name
(RefSeq) WD repeat-containing protein 13
KO
K24739
WD repeat-containing protein 13
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
spen04990
]
107005248
Domain-containing proteins not elsewhere classified [BR:
spen04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
107005248
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_EML
WDR90_beta-prop_4th
WD40_Gbeta
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_SPT8
KNTC1_N
WD40_like
Beta-prop_Nup120_160
Beta-prop_EMC1_N
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
107005248
NCBI-ProteinID:
XP_015059277
UniProt:
A0ABM1FN69
LinkDB
All DBs
Position
1:complement(107683256..107691366)
Genome browser
AA seq
493 aa
AA seq
DB search
MAESTTIQRSSPEGDDHELKEENIEKKKDFTANPEFFSCMLQPVPADSDPNYIGIRRFLL
HRKAESGVLRRKDWRCNGKGYVAYRNYISRPRNWEALQIPSRPSTPGNSGRWMPSASPVS
QLLESDSWNSLKDLRSPSQVSQALSRTTSFSSNVSDTDDRPRRRSEPAYSFVGMHCIFDQ
CKAMVTVIKFGHMSSDLLAYGATDGSLTVCSVSMPPSVIKQLTGHSKDVTDFDFSTNNQY
IASSSMDKTVRVWDISRGLCIRVIYGVSSQLCIRFHPVNNNFLSAGNAKKEINVFNFSTG
RTISTTVVDGEVTAMDHDHTGQFIFCGDSQGCIYTVSMNSHTGALSRTHRNRSSSKHRSA
VTTVEYRTFSLLARGPVLLTFTRDGSLSFFSISLEMKGYLTLRCSLKLAPRLHSIRASFC
PLLSLEKGEYIVAGSEDANVYFYDLTRPKNTCVNKLQGHGYPVIGIAWNHGENLLASSDF
GGTVIVWKRAKTA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatcgacgacaattcagaggagctcgcctgaaggtgatgatcatgaactgaag
gaggagaatattgagaagaaaaaggattttactgcaaatcctgagtttttcagttgtatg
cttcagccagtgcctgccgattcagatccaaattacattggaattcgccggttcctcctt
catcgcaaagctgaatccggtgtgcttcgtcgcaaggactggagatgcaatggaaaagga
tacgtagcttatcgtaattatattagtaggccaaggaattgggaggcattgcaaatacca
agccgaccaagtaccccagggaacagtgggcgatggatgccttcagcaagtccagtttcc
cagttactcgagtcggatagctggaattccttaaaggatttacgaagtcccagtcaagta
agtcaagcattgagtcggactactagtttcagttcaaatgtgagtgacactgatgatcgt
ccacgtagaaggtcggaacctgcatattcctttgtggggatgcattgcatttttgatcaa
tgcaaggccatggttacggttataaagtttgggcatatgagttctgatctacttgcatat
ggagcaaccgatggcagtttgactgtatgcagtgtctccatgcccccttcagtcattaag
cagttaacagggcattcaaaagatgtcacagattttgacttctccacaaacaatcagtac
attgcatcatcttcaatggataaaactgtcagagtatgggatatttctagaggcctttgc
attagggtgatttatggagtctcttcacagctttgtattcgatttcatcctgtgaacaac
aacttcctttctgctggcaatgcaaaaaaagaaataaatgtgttcaattttagcacgggg
agaacgatcagtacaactgtggtcgacggcgaagtcactgccatggaccatgaccacact
ggtcagtttattttctgcggtgatagtcaggggtgtatttacacagttagtatgaactcc
catacaggtgcactatctcgaactcatcggaatagaagtagcagtaagcatagatctgct
gttacaactgttgagtacaggacattttctctgctggcacgaggccctgtcctgctgact
tttactcgtgacggaagtttgtcttttttcagcatctctttggagatgaaaggttatttg
acactccggtgctcactgaagctggctccacggctacacagcattcgtgcttctttctgt
cctttactttcccttgaaaagggagaatacatagttgctgggagtgaagatgcaaatgtt
tacttttatgatttgactcgaccaaagaatacatgtgttaacaaacttcagggccatggc
tatccagtaataggtattgcttggaatcatggagagaacttgttagcgtcgtctgatttt
ggcggcaccgtcattgtatggaagagagcaaaaacagcttaa
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