Solanum pennellii: 107005444
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Entry
107005444 CDS
T04130
Name
(RefSeq) long chain acyl-CoA synthetase 8-like
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
spen
Solanum pennellii
Pathway
spen00061
Fatty acid biosynthesis
spen00071
Fatty acid degradation
spen01100
Metabolic pathways
spen01212
Fatty acid metabolism
spen04146
Peroxisome
Module
spen_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
107005444
00071 Fatty acid degradation
107005444
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107005444
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spen01004
]
107005444
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107005444
Enzymes [BR:
spen01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
107005444
Lipid biosynthesis proteins [BR:
spen01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
107005444
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of breast milk
107005444
Exosomal proteins of breast cancer cells
107005444
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
107005444
NCBI-ProteinID:
XP_015059528
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Position
12:2601593..2606740
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AA seq
733 aa
AA seq
DB search
MEGSEGSNPNTNVVERMDSSCYVSFFKDQGSFGVVAAVVIAIIVPLYLSIVLMRKKKAKQ
RGVPVKAGGEAGLTMRNAKSAKLIEVPWEGATTMTALFEKSCRKHSSKRCLGTRKLVSRD
FVTAKDGRKFEKLHLSEYHWESYGQTFDRACNFASGLVNLGHDVETRAAIFSETRAEWII
AFQGCFRQNITVVTIYASLGDDALIHSLNETQASTLICDAKQLKKLVAINSNLKTISNVI
YFEDDETAIDSSTSTDIDSWRITSFSEVEKLGKSNPIQPILPIKKDIAVIMYTSGSTGMP
KGVMITHGNIVATAAAVMTVIPKLGSNDVYLGYLPLAHVFELAAETVMLTAGASIGYGSA
LTLTDTSNKIMKGTKGDASALKPTLMAAVPAILDRVKDGVIKKVEEKGGSAKKLFDIAFK
RRLTAIEGSWFGAWGLEKILWEVMIFKKIRSVLGGDIRFMLCGGAPLSGDTQRFINICMG
APIGQGYGLTETFAGAAFSESDDPSVGRVGPPVPCCYIKLISWEEGGYTVADKPMPRGEV
VVGGNSVTAGYFNNGDKTNEVYKVDERGMRWFYTGDIGRFHPDGCLEVIDRKKDIVKLQH
GEYISLGKVEAALSSSNYVDNIMAYADPFHNYCVALVVPSQKVLEKWAQENGIEHRAFSD
LCNKVEAVNEVQQSLSKVGKAARLDKFEIPAKIKLIPEPWTPESGLVTAALKLKREPLKA
KFKDELINLYHSN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttctgaaggaagtaatccgaatacgaatgtcgttgagagaatggacagtagt
tgttatgtctccttcttcaaagaccagggttcatttggggttgttgctgcggttgtaatt
gcgattatagtacctttatacctctccattgtgcttatgaggaagaaaaaggcgaaacag
agaggagttccggttaaagctggtggtgaggcaggtcttacaatgcggaatgctaaatca
gccaagttgattgaagttccgtgggaaggggctacgactatgacagctttattcgaaaag
tcttgtaggaaacattcgagtaaacgttgtcttggaacaagaaaactagttagtagggac
tttgtaacagcaaaggatggaaggaagtttgagaaacttcacttgagtgagtatcactgg
gagagttatggacaaacgtttgatcgggcttgcaactttgcatctggacttgttaattta
ggtcatgatgtggagactcgcgctgctatattctctgaaactcgtgcagagtggatcatt
gcatttcagggatgcttccgccagaatataactgtcgttactatttatgcttctttggga
gatgatgcccttatacactcgttaaacgagactcaagcatccacattgatttgtgatgcc
aagcaacttaaaaaattggttgcaatcaattctaacctgaaaaccatctcgaatgtcata
tactttgaagatgatgagactgcaatagattcaagcacttctacggatattgatagctgg
aggattacatctttctccgaagttgaaaaacttggtaagagtaatcctattcaaccaata
ctgcctataaagaaagatatcgcggtgatcatgtatacaagtggtagcacaggcatgcct
aagggtgtcatgataactcatggcaacattgtagccacggcagctgcagttatgactgtc
attccaaaacttggcagcaacgatgtctatttggggtatctacctttagctcatgttttt
gagttagcggctgagactgttatgttgactgctggtgcttcaatcggttatggctcggct
ctgacattgacagatacatctaataaaattatgaaagggactaaaggagatgcctcagct
ttaaagcctactttaatggcagcagttccagccattctcgatcgtgttaaggacggtgtt
ataaagaaggtggaggagaagggaggatctgcaaagaaacttttcgatattgcctttaaa
cgtcgattgactgctatagaaggtagctggtttggagcatggggtctagagaaaatacta
tgggaggtgatgatatttaaaaagatacgatcagtactcggaggagatatacgtttcatg
ctttgtggtggtgctcctctatcaggagatacacaaagatttatcaacatttgtatggga
gcgcctattggtcaaggatatggcttgacagagacatttgcaggagcagccttttccgag
tcagatgatccttctgttggtcgcgttggtccacctgttccttgttgctatataaagctt
atttcttgggaagaaggaggttacacagttgctgataagccgatgcctcggggagaagta
gttgttggtggtaacagtgttactgctggttacttcaacaatggtgataaaactaatgag
gtgtacaaggttgatgagagagggatgcgctggttctacactggtgatattggaaggttt
catcctgatggatgcctcgaagtcattgatagaaagaaagatattgttaaacttcagcac
ggggagtatatctcacttggaaaggttgaggctgcactttcctcaagcaattatgtggat
aacatcatggcctatgcagaccccttccacaattactgtgttgcactagttgttccttca
caaaaggtgcttgagaaatgggcacaagaaaatggcatcgagcatagagctttttctgat
ctgtgcaacaaagttgaagcagtcaatgaggtccagcaatcactctcaaaggtaggcaaa
gctgcaagattggacaagtttgagattcctgcaaagatcaagttgatacccgagccatgg
acgcctgagtccggattagtcactgcagctctcaaactgaagcgcgaacccctaaaggcg
aaatttaaggatgaacttataaacttgtatcacagtaactga
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