Solanum pennellii: 107005445
Help
Entry
107005445 CDS
T04130
Name
(RefSeq) nuclear transcription factor Y subunit A-5-like isoform X3
KO
K08064
nuclear transcription factor Y, alpha
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107005445
Transcription factors [BR:
spen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
107005445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
107005445
NCBI-ProteinID:
XP_015059529
LinkDB
All DBs
Position
12:complement(2606849..2612524)
Genome browser
AA seq
283 aa
AA seq
DB search
MVSSNEQETSHNNRKIGLRSEISISLLPGDMKSLDPDLQGETLRLTHTTLNSQDKMTASG
KTNSQDQCASSEYVHDERYGRDMQVQIKPALFSLQNEVANSTGLSAFGYSDPYISSLYTA
YGPQPYPQMMGIAPTRVPLPVDMAEDGPIYVNAKQYHGILRRRQIRAKLEAQNKLVKNRK
PYLHESRHLHAVNRVRGSGGRFLSSKKVHQSDPNSYPTNSTSSLDSVEHEGSTSAFSSVR
QDVVHNGINFQQQQPDHMAFSVSSHMVITMQGNGTQQHAPVVR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggtgagttccaatgaacaagaaacttcacataataatcggaaaattggtctcagaagt
gaaatttccatctccttgctgccaggagatatgaagtctttggatcctgacttacaaggc
gagacattgcggttgacacatacaactcttaactctcaagacaaaatgactgcctcaggg
aaaacaaattctcaagatcaatgtgcttcctcagaatatgttcatgatgaaagatatgga
agagatatgcaggttcaaataaagcctgctcttttttctttgcaaaatgaagtggccaat
tcaactggtttatctgcttttggctactctgatccctatatcagtagcttatatactgct
tatggacctcagccttatcctcaaatgatgggcatagcacctactcgtgtcccactcccc
gttgatatggcagaggatggaccaatctatgttaatgcaaaacagtaccatgggatccta
aggcggagacagatacgtgcaaagcttgaggctcagaacaaacttgtcaaaaatagaaag
ccatatcttcatgagtcacgacatcttcatgcagtgaacagagttagagggtcgggtgga
cgtttcctcagctcaaagaaagttcatcaatctgatccaaatagttatcctactaactca
acttcttctctagactcagttgagcatgaaggttcaacttctgctttctcaagtgtccgt
caagatgtcgtccacaatggcatcaacttccagcagcagcagcctgatcacatggccttc
agtgtatcctctcatatggttattaccatgcaaggcaatgggactcagcaacacgctcca
gttgtccggtga
DBGET
integrated database retrieval system
