Solanum pennellii: 107005545
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Entry
107005545 CDS
T04130
Name
(RefSeq) coatomer subunit beta-1-like
KO
K17301
coatomer subunit beta
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107005545
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107005545
Membrane trafficking [BR:
spen04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
107005545
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
107005545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Alpha_adaptinC2
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
107005545
NCBI-ProteinID:
XP_015059659
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Position
1:complement(2007921..2018123)
Genome browser
AA seq
949 aa
AA seq
DB search
MEKSCSLLIHFDKGTPALANEIKEALEGNDIPAKVEAMKKAVMLLLNGETLPQLFITIIR
YVLPSEDHTIQKLLLLYLEIIEKTDSKGRVLPEMILICQNLRNNLQHPNEYLRGATLRFL
CRLNEVDIIEPLIPSIMNNLEHRHPFVRRNAILAVMSVYKLPHGEQLLVDAPEKIENLLT
TEQDPSAKRNAFLMLFQCAQERAINYLLTHVDRVSDWGELLQMVVLDLIRKVCRTNKAEK
GRYIKIIISLLTAPSAAVTYECAGTLVSLSSAPSAIRAAANTYCQLLQSQSDNNVKLIVL
DRLNELKSSHKDVMVDMIMDVLRALSSPNLDIRRKTLDIVLELITPRNINEVVLTLKKEV
VKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVVVFVR
EIIETNPKLRVSIVTRLLDTFYQIRAARVCSCALWIIGEYCLSLSEVESGIATIKQCLGD
LPFFSVSEESEAADSSKKTQQANSITTLSSRRPAVLADGTYATQSAASETAFSPPTVVQG
SLTTGNLRSLLLTGDFFLGAVVACTLTKLILRLEEVQPSKLELNKATTNALLIMVSMIQL
GQSHALPHPIDNDSFDRIVLCIRLLCNTGNEVRKIWLSSCRESFVNMLSDKQLRETEEIK
AKAQISHSQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKDENDANKLSRVLQ
LTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTIA
PESSKQIKANIKVSSTETGVIFGNIVYESSNVLERTVVVLNDIHIDIMDYISPAVCSEAA
FRTMWAEFEWENKVAVNTVIQDEKGFLDHIIKSTNMKCLTAPSALEDECGFLAANLYAKS
VFGEDALVNLSIEKQSDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGN
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcatgctcattgttgatacattttgataagggtacgcctgctcttgccaat
gagatcaaagaagcacttgaaggaaatgatatccccgccaaggttgaagctatgaagaaa
gccgtaatgcttttattgaatggagaaaccctacctcagctcttcatcactattattaga
tatgtcttgccttctgaggatcacacaattcaaaaactgttacttttgtatttggagatc
attgagaagacagattctaaggggcgtgtgctgcccgagatgatcctaatctgccagaac
ttgaggaataatttgcagcatcccaatgagtaccttcgtggagctacgttgagatttctt
tgcaggctgaatgaggttgatataattgaacctcttattccatcaattatgaacaacttg
gagcaccgacatccatttgtgaggaggaatgcaattcttgctgtgatgtctgtttacaag
ctcccacatggtgagcagctcctggtagacgcaccagagaagattgagaatctcctaacc
actgagcaggatccatctgctaagaggaatgcgtttcttatgctcttccaatgtgctcag
gagcgtgccatcaattacctcttgactcatgttgatagagtctctgattggggcgagtta
cttcagatggttgtattggatttgattcgaaaagtttgcaggacaaacaaagcggagaaa
gggaggtatatcaaaattattatatcattgttaactgccccttctgctgctgttacatat
gaatgtgctggaactcttgtttctttatcttctgccccaagtgctataagagctgcagcc
aacacctactgtcaacttcttcaatctcaaagtgacaacaatgttaagctcatcgtgctt
gatcgactgaatgaattgaaatcttcgcataaagatgtcatggttgatatgataatggat
gtccttagagcactttccagcccgaaccttgatatccgtagaaaaacactagacattgtt
cttgaattgatcactcccaggaatattaatgaggttgttctcactctgaagaaagaagtt
gtgaaaactcaaagtggtgagcttgagaaaaatggtgagtaccgccaaatgctcatccaa
gccattcattcatgtgccataaagttcccagaagtggcaagcactgtggtccatctattg
atggacttcttgggtgacagcaacgttgcttctgcaattgatgtggtcgtttttgtccgg
gagattattgaaacaaacccaaaattaagggtttccattgtgacaaggttactagacact
ttctaccaaattcgagcagcacgtgtttgttcctgtgccctttggatcattggagagtat
tgtctatctctctctgaagttgagagtggcatcgcaactatcaagcagtgccttggagac
ctaccatttttctcagtttctgaggaaagtgaagctgctgattcttcaaaaaagactcag
caagcaaactccattactactttgtcatctagaagaccagctgtacttgctgatgggaca
tatgctactcaaagtgctgcatctgaaactgctttctctcccccgacagttgttcaagga
tctttaaccactggaaacttgagatcccttcttctcactggtgatttcttcctgggagca
gttgttgcttgtacactgactaagctcattctgaggctggaagaagttcagccatcaaaa
cttgaattgaacaaagctacaacaaatgcattactgatcatggtctcaatgatacagcta
gggcagtctcatgctcttcctcacccaattgacaatgattcttttgacagaatagttctt
tgcataagattgctctgtaatacgggcaatgaggttaggaagatctggttgagctcttgt
cgcgagagttttgttaatatgctttctgataaacaactacgagagacggaggagatcaaa
gcaaaggcacaaatttctcactcccagccagatgacctcattgatttctaccatttgaag
agtaggaagggaatgagccaactggagttggaagatgaagtccaggatgatttgaaacgt
gccactggagaattcgtcaaggatgagaatgatgctaacaagctaagcagggtactgcaa
cttacaggatttagtgatcctgtttatgctgaagcatatgtaacagttcatcattatgac
attgtcctagatgttaccgtgataaatcgaaccaaagagacacttcagaatttgtgtttg
gaactggcaaccatgggtgatcttaagctcgttgagcgtccacagaattatactatagct
cctgagtcaagcaagcagataaaagctaatatcaaggtgtcttccaccgagactggagtg
atttttggtaacattgtctatgagtcttcaaatgtgctcgagcgaactgttgttgtgctc
aatgatatccatattgacatcatggattacatctctcctgctgtttgcagtgaggctgct
tttagaactatgtgggctgaatttgagtgggaaaacaaggttgctgtcaacactgtcatt
caagatgaaaaaggatttcttgaccatattatcaaatcaaccaacatgaagtgtctgact
gcaccatctgctctggaagatgaatgtggattccttgctgctaatctttatgcaaagagt
gtgtttggagaggatgctttggtgaatttgagcattgaaaagcaatcagatggtaagctg
agtggttatattagaataagaagcaaaacacaaggaattgctcttagcttgggagacaaa
ataacactcaagcagaagggaggcaattga
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